Rn04244403_m1

• Gene Symbol: Sall1
• Gene Name: spalt-like transcription factor 1
• Gene Aliases: -
• Chromosome Location: Chr.19: 23387741 - 23405026 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sall1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107415.2	NP_001100885.2	1 - 2	102		70
	XM_006255259.2	XP_006255321.1	2 - 3	636		70
	XM_006255260.2	XP_006255322.1	2 - 3	227		70

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1900000271.rn.1

• Set Membership: Amplicon length less than or equal to 70, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
ureteric bud development
branching involved in ureteric bud morphogenesis
kidney development
neural tube closure
ventricular septum development
mesenchymal to epithelial transition involved in metanephros morphogenesis
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis
transcription from RNA polymerase II promoter
heart development
biological_process
gonad development
olfactory nerve development
olfactory bulb development
olfactory bulb interneuron differentiation
neural tube development
pituitary gland development
positive regulation of Wnt signaling pathway
adrenal gland development
inductive cell-cell signaling
forelimb morphogenesis
hindlimb morphogenesis
outer ear morphogenesis
embryonic digit morphogenesis
positive regulation of neuron differentiation
negative regulation of smoothened signaling pathway
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
embryonic digestive tract development
limb development
olfactory bulb mitral cell layer development
kidney epithelium development
ureteric bud invasion
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis
positive regulation of branching involved in ureteric bud morphogenesis
regulation of neural precursor cell proliferation
negative regulation of mesoderm development
negative regulation of ectoderm development

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II transcription factor binding
RNA polymerase II transcription coactivator activity
enhancer sequence-specific DNA binding
molecular_function
DNA binding
chromatin binding
histone deacetylase activity
beta-catenin binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1900002026.rn.1	TC1900000271.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1900002024.rn.1	TC1900000271.rn.1	RTA TC