Rn04280086_g1

• Gene Symbol: Tmem80
• Gene Name: transmembrane protein 80
• Gene Aliases: RGD1308399
• Chromosome Location: Chr.1: 214317300 - 214326293 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tmem80
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045202.1		3 - 4	871		94
GenBank mRNA	CB546081.1	-	3 - 4	218		94

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CO565251.1	-		230		Chr. - - [-] on Build	94
GenBankmRNA	CF977791.1	-		159		Chr. - - [-] on Build	94
GenBankmRNA	CB735444.1	-		136		Chr. - - [-] on Build	94

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	DEAF1 transcription factor	Deaf1		-5.4kb	Anti-sense	Chr. 1 - 214283787 - 214317466 on NCBI Build Rnor_6.0
Downstream	EPS8-like 2	Eps8l2		4.9kb	Sense	Chr. 1 - 214327992 - 214353466 on NCBI Build Rnor_6.0

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100002894.rn.1

• Set Membership: Amplicon length between 86 and 100, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0100022967.rn.1	TC0100002894.rn.1	RTA TC