Rn04340164_m1 Best Coverage

• Gene Symbol: Tnfrsf11a
• Gene Name: tumor necrosis factor receptor superfamily, member 11a, NFKB activator
• Gene Aliases: RANK, RGD1563614
• Chromosome Location: Chr.13: 25778306 - 25835802 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tnfrsf11a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001271235.1	NP_001258164.1	9 - 10	1566		63
	XM_008769487.1	XP_008767709.1	9 - 10	1544		63

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300000070.rn.1

• Set Membership: Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Process(es)

ossification
adaptive immune response
multicellular organism development
response to radiation
programmed cell death
osteoclast differentiation
response to lipopolysaccharide
tumor necrosis factor-mediated signaling pathway
response to cytokine
response to tumor necrosis factor
positive regulation of JUN kinase activity
lymph node development
positive regulation of sequence-specific DNA binding transcription factor activity
positive regulation of NF-kappaB transcription factor activity
circadian temperature homeostasis
mammary gland alveolus development
response to interleukin-1
positive regulation of fever generation by positive regulation of prostaglandin secretion
TNFSF11-mediated signaling pathway
positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signaling

Function(s)

molecular_function
transmembrane signaling receptor activity
tumor necrosis factor-activated receptor activity
cytokine binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P069421	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P069419	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P069419	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P069419	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10763269	-	-
Rat Genome 230 2.0 Array	1394313_PM_at	-	-
Rat Genome 230 2.0 Array	1394313_at	-	-
Affymetrix Rat Clariom S Assay	PSR1300000299.rn.1	TC1300000070.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300000298.rn.1	TC1300000070.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300000300.rn.1	TC1300000070.rn.1	RTA TC
Rat Expression Set 230	1394313_at	-	-
Rat Expression Set 230	1394313_PM_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352887	-	-
RatRef-12 Expression BeadChip	ILMN_48811	-	-