Rn04342827_g1 Best Coverage

• Gene Symbol: Cpsf4
• Gene Name: cleavage and polyadenylation specific factor 4
• Gene Aliases: -
• Chromosome Location: Chr.12: 11199893 - 11215684 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cpsf4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001012351.2	NP_001012351.1	8	1319		102
	XM_006248869.2	XP_006248931.1	8	1434		102
	XM_006248870.2	XP_006248932.1	8	1359		102
GenBank mRNA	BC089824.1	-	8	1321	7309116	102
	Y17326.1	-	8	971		102

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200001080.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cpsf4

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

mRNA processing

Function(s)

nucleic acid binding
RNA binding
zinc ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P496483	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	290461	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	789770	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	814199	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	365904	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	888519	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	534193	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	480665	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	595518	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	794219	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	491488	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	502407	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	285883	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	81744	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	26172	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P496483	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P496483	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P496483	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P496483	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	75483	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	56510	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10760174	-	-
Affymetrix Rat Gene 1.0 ST Array	10756611	-	-
Affymetrix Rat Gene 1.0 ST Array	10760181	-	-
Affymetrix Rat Gene 1.0 ST Array	10756616	-	-
Affymetrix Rat Gene 1.0 ST Array	10760175	-	-
Affymetrix Rat Gene 1.0 ST Array	10760179	-	-
Affymetrix Rat Gene 1.0 ST Array	10756610	-	-
Affymetrix Rat Gene 1.0 ST Array	10760176	-	-
Affymetrix Rat Gene 1.0 ST Array	10756612	-	-
Affymetrix Rat Gene 1.0 ST Array	10760183	-	-
Affymetrix Rat Gene 1.0 ST Array	10756615	-	-
Affymetrix Rat Gene 1.0 ST Array	10760182	-	-
Affymetrix Rat Gene 1.0 ST Array	10760184	-	-
Affymetrix Rat Gene 1.0 ST Array	10756614	-	-
Affymetrix Rat Gene 1.0 ST Array	10760180	-	-
Affymetrix Rat Gene 1.0 ST Array	10756613	-	-
Affymetrix Rat Gene 1.1 ST Array	10756608	-	-
Affymetrix Rat Gene 1.1 ST Array	10760173	-	-
Rat Genome 230 2.0 Array	1398878_at	-	-
Rat Genome 230 2.0 Array	1398878_PM_at	-	-
Affymetrix HT Rat Focus Array	1398878_at	-	-
Affymetrix HT Rat Focus Array	1398878_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200009160.rn.1	TC1200001080.rn.1	RTA TC
Rat Expression Set 230	1398878_at	-	-
Rat Expression Set 230	1398878_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10756608	-	-
Affymetrix Rat Gene 1.0 ST Array	10760173	-	-
Rat Genome U34 Set	rc_AA799667_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21146329	-	-