Ss03386511_s1 Best Coverage

• Gene Symbol: TRAF6
• Gene Name: TNF receptor associated factor 6
• Gene Aliases: -
• Chromosome Location: Chr.2: 24602749 - 24628263 on Build Sscrofa11.1
• Species: Pig
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TRAF6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001105286.1	NP_001098756.1	6	1453		79
	XM_005652801.2	XP_005652858.1		1739		79
	XM_013990069.2	XP_013845523.1		1617		79
GenBank mRNA	AK393349.1	-	7	1684		79
	EU095967.1	-	6	1453		79

More Information

• Set Membership: Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Recommended Assay, Sus scrofa, Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
ossification
in utero embryonic development
neural tube closure
positive regulation of T cell cytokine production
cellular response to DNA damage stimulus
I-kappaB kinase/NF-kappaB signaling
activation of NF-kappaB-inducing kinase activity
antigen processing and presentation of exogenous peptide antigen via MHC class II
osteoclast differentiation
positive regulation of lipopolysaccharide-mediated signaling pathway
positive regulation of interleukin-2 production
T-helper 1 type immune response
positive regulation of T cell proliferation
odontogenesis of dentin-containing tooth
regulation of apoptotic process
myeloid dendritic cell differentiation
positive regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of JUN kinase activity
bone resorption
positive regulation of osteoclast differentiation
positive regulation of transcription from RNA polymerase II promoter
cell development
T cell receptor signaling pathway
regulation of immunoglobulin secretion
positive regulation of NF-kappaB transcription factor activity
protein autoubiquitination
protein K63-linked ubiquitination
cellular response to lipopolysaccharide
positive regulation of leukocyte adhesion to vascular endothelial cell
positive regulation of transcription regulatory region DNA binding

Function(s)

ubiquitin-protein transferase activity
zinc ion binding
mitogen-activated protein kinase kinase kinase binding
ubiquitin conjugating enzyme binding
ubiquitin protein ligase binding
thioesterase binding
identical protein binding
histone deacetylase binding
protein kinase B binding
protein N-terminus binding
ubiquitin protein ligase activity