Ss03389951_m1 Best Coverage

• Gene Symbol: SLA-DQA1
• Gene Name: MHC class II histocompatibility antigen SLA-DQA
• Gene Aliases: SLA-DQA
• Chromosome Location: Chr.7: 24953472 - 24959313 on Build Sscrofa11.1
• Species: Pig
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SLA-DQA1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001114062.2	NP_001107534.2	1 - 2	117		75
	NM_001130224.1	NP_001123696.1	1 - 2	124		75
GenBank mRNA	AB215110.1	-	1 - 2	83		75
	AB215111.1	-	1 - 2	83		75
	AB215112.1	-	1 - 2	83		75
	AK232063.1	-	1 - 2	152		75
	AK236590.1	-	1 - 2	157		75
	AK239488.1	-	1 - 2	135		75
	AK240184.1	-	1 - 2	137		75
	AK352128.1	-	1 - 2	135		75
	AK393871.1	-	1 - 2	135		75
	AK393954.1	-	1 - 2	136		75
	AK396120.1	-	1 - 2	155		75
	AK396178.1	-	1 - 2	155		75
	AK397174.1	-	1 - 2	135		75
	AK397673.1	-	1 - 2	155		75
	AK397819.1	-	1 - 2	135		75
	AK397867.1	-	1 - 2	138		75
	AK398122.1	-	1 - 2	135		75
	AK398404.1	-	1 - 2	135		75
	AK398488.1	-	1 - 2	149		75
	AK398827.1	-	1 - 2	135		75
	AK399080.1	-	1 - 2	151		75
	AY102473.1	-	1 - 2	83		75
	AY102474.1	-	1 - 2	83		75
	AY191777.1	-	1 - 2	124		75
	AY243100.1	-	1 - 2	83		75
	AY247777.1	-	1 - 2	123		75
	AY285925.1	-	1 - 2	123		75
	AY285930.1	-	1 - 2	104		75
	AY285931.1	-	1 - 2	117		75
	AY285932.1	-	1 - 2	151		75
	AY285934.1	-	1 - 2	119		75
	AY459303.1	-	1 - 2	124		75
	AY906855.1	-	1 - 2	104		75
	DQ003300.1	-	1 - 2	114		75
	DQ159886.1	-	1 - 2	83		75
	DQ159887.1	-	1 - 2	83		75
	DQ159888.1	-	1 - 2	83		75
	DQ159889.1	-	1 - 2	83		75
	DQ159890.1	-	1 - 2	83		75
	DQ159891.1	-	1 - 2	83		75
	DQ159892.1	-	1 - 2	83		75
	DQ159895.1	-	1 - 2	83		75
	DQ159896.1	-	1 - 2	83		75
	DQ159899.1	-	1 - 2	83		75
	DQ159900.1	-	1 - 2	83		75
	DQ159901.1	-	1 - 2	83		75
	DQ159902.1	-	1 - 2	83		75
	DQ159903.1	-	1 - 2	83		75
	DQ159904.1	-	1 - 2	83		75
	DQ275670.1	-	1 - 2	83		75
	DQ883217.1	-	1 - 2	123		75
	DQ883218.1	-	1 - 2	123		75
	DQ917643.1	-	1 - 2	83		75
	EU432058.1	-	1 - 2	104		75
	EU432059.1	-	1 - 2	104		75
	EU432060.1	-	1 - 2	104		75
	EU722912.1	-	1 - 2	123		75
	EU722913.1	-	1 - 2	123		75
	FJ861367.1	-	1 - 2	83		75
	JQ511977.1	-	1 - 2	83		75
	JQ511978.1	-	1 - 2	83		75
	KF026046.1	-	1 - 2	83		75
	KJ776451.1	-	1 - 2	83		75
	KJ776452.1	-	1 - 2	83		75
KT031051.1	-	1 - 2	83		75
KT031052.1	-	1 - 2	83		75
KT031053.1	-	1 - 2	83		75
KT031054.2	-	1 - 2	83		75
KT031055.2	-	1 - 2	83		75
KT031056.2	-	1 - 2	83		75
KT031057.2	-	1 - 2	83		75
KT031058.2	-	1 - 2	83		75
KT031059.2	-	1 - 2	83		75
KT031060.2	-	1 - 2	83		75
KT031062.2	-	1 - 2	83		75
KT031063.2	-	1 - 2	83		75
KT031065.1	-	1 - 2	83		75
KT031066.2	-	1 - 2	83		75
KU258856.1	-	1 - 2	83		75
KU258857.1	-	1 - 2	83		75
KU258858.1	-	1 - 2	83		75
KU258859.1	-	1 - 2	83		75
KU258860.1	-	1 - 2	83		75
KU258861.1	-	1 - 2	83		75
KU258865.1	-	1 - 2	83		75
KU258866.1	-	1 - 2	83		75
KU258867.1	-	1 - 2	83		75
KU258868.1	-	1 - 2	83		75
KX786938.1	-	1 - 2	123		75
KX786939.1	-	1 - 2	123		75
KX786940.1	-	1 - 2	123		75
KX786941.1	-	1 - 2	123		75
KX786942.1	-	1 - 2	123		75
KX786943.1	-	1 - 2	123		75
M29938.1	-	1 - 2	95		75
M29939.1	-	1 - 2	151		75

More Information

• Set Membership: Amplicon length between 71 and 85, 3' Most, Recommended Assay, Sus scrofa, Probe spans exons

Panther Classification:

Molecular Function -

major histocompatibility complex protein

Gene Ontology Categories:

Process(es)

adaptive immune response
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II