247881

Gene Symbol:

PHACTR4 AASDH ASB18 CLCC1 DENND6A FBXO40 FLJ43879 GOSR1 HDAC9 HP09025 JOSD1 KIAA1257 LINC00963 LYPD4 NAF1 NFATC3 NFS1 NUAK2 OSBPL2 PDK3 RDH13 RIN1 SLC22A5 SMIM11A SNX15 STIL TMEM170B TSPAN5 ZNF17 ZNF578 ZNF681 ZNF789 ZSCAN29

Gene Name:

phosphatase and actin regulator 4

aminoadipate-semialdehyde dehydrogenase

ankyrin repeat and SOCS box containing 18

chloride channel CLIC like 1

DENN domain containing 6A

F-box protein 40

FLJ43879 protein

golgi SNAP receptor complex member 1

histone deacetylase 9

uncharacterized LOC100652929

Josephin domain containing 1

KIAA1257

long intergenic non-protein coding RNA 963

LY6/PLAUR domain containing 4

nuclear assembly factor 1 ribonucleoprotein

nuclear factor of activated T-cells 3

NFS1 cysteine desulfurase

NUAK family kinase 2

oxysterol binding protein like 2

pyruvate dehydrogenase kinase 3

retinol dehydrogenase 13 (all-trans/9-cis)

Ras and Rab interactor 1

solute carrier family 22 member 5

small integral membrane protein 11A

sorting nexin 15

SCL/TAL1 interrupting locus

transmembrane protein 170B

tetraspanin 5

zinc finger protein 17

zinc finger protein 578

zinc finger protein 681

zinc finger protein 789

zinc finger and SCAN domain containing 29

Gene Aliases:

PPP1R124

ACSF4, LYS2, NRPS1098, NRPS998

ASB-18

MCLC

AFI1A, FAM116A

FBX40

-

GOLIM2, GOS-28, GOS28, GOS28/P28, GS28, P28

HD7, HD7b, HD9, HDAC, HDAC7, HDAC7B, HDAC9B, HDAC9FL, HDRP, MITR

-

dJ508I15.2

-

-

SMR

-

NFAT4, NFATX

HUSSY-08, IscS, NIFS

SNARK

DFNA67, DNFA67, ORP-2, ORP2

CMTX6, GS1-358P8.4

SDR7C3

-

CDSP, OCTN2

C21orf51, FAM165B, SMIM11

HSAF001435

MCPH7, SIL

-

NET-4, NET4, TM4SF9, TSPAN-5

HPF3, KOX10

-

-

-

ZNF690, Zfp690

Chromosome Location:

Chr.1: 28369574 - 28500369 on Build GRCh38

Chromosome Location:

Chr.4: 56337687 - 56387677 on Build GRCh38

Chromosome Location:

Chr.2: 236194872 - 236264345 on Build GRCh38

Chromosome Location:

Chr.1: 108929508 - 108963499 on Build GRCh38

Chromosome Location:

Chr.3: 57625454 - 57693118 on Build GRCh38

Chromosome Location:

Chr.3: 121593323 - 121630292 on Build GRCh38

Chromosome Location:

Chr.2: 238919302 - 238926269 on Build GRCh38

Chromosome Location:

Chr.17: 30477402 - 30528314 on Build GRCh38

Chromosome Location:

Chr.7: 18086942 - 19003745 on Build GRCh38

Chromosome Location:

Chr.17: 79707266 - 79712317 on Build GRCh38

Chromosome Location:

Chr.22: 38685543 - 38701418 on Build GRCh38

Chromosome Location:

Chr.3: 128910186 - 129032431 on Build GRCh38

Chromosome Location:

Chr.9: 129488660 - 129513686 on Build GRCh38

Chromosome Location:

Chr.19: 41833686 - 41844771 on Build GRCh38

Chromosome Location:

Chr.4: 163109133 - 163170388 on Build GRCh38

Chromosome Location:

Chr.16: 68085366 - 68229259 on Build GRCh38

Chromosome Location:

Chr.20: 35668688 - 35699365 on Build GRCh38

Chromosome Location:

Chr.1: 205302059 - 205321791 on Build GRCh38

Chromosome Location:

Chr.20: 62238485 - 62296213 on Build GRCh38

Chromosome Location:

Chr.X: 24465227 - 24550466 on Build GRCh38

Chromosome Location:

Chr.19: 55038895 - 55069774 on Build GRCh38

Chromosome Location:

Chr.11: 66332063 - 66337235 on Build GRCh38

Chromosome Location:

Chr.5: 132369704 - 132395614 on Build GRCh38

Chromosome Location:

Chr.21: 34375450 - 34402777 on Build GRCh38

Chromosome Location:

Chr.11: 65027408 - 65040572 on Build GRCh38

Chromosome Location:

Chr.1: 47250139 - 47314787 on Build GRCh38

Chromosome Location:

Chr.6: 11538042 - 11583524 on Build GRCh38

Chromosome Location:

Chr.4: 98470367 - 98658661 on Build GRCh38

Chromosome Location:

Chr.19: 57409252 - 57421939 on Build GRCh38

Chromosome Location:

Chr.19: 52453514 - 52516878 on Build GRCh38

Chromosome Location:

Chr.19: 23739195 - 23758891 on Build GRCh38

Chromosome Location:

Chr.7: 99472819 - 99487600 on Build GRCh38

Chromosome Location:

Chr.15: 43358172 - 43371032 on Build GRCh38

UniGene ID:

Hs.225641

Hs.104347

Hs.639909

Hs.658489

Hs.91085

Hs.272564

Hs.516791

Hs.462680

Hs.196054

Hs.559249

Hs.3094

Hs.518247

Hs.529860

Hs.382361

Hs.129095

Hs.436585

Hs.194692

Hs.497512

Hs.473254

Hs.296031

Hs.327631

Hs.1030

Hs.443572

Hs.656195

Hs.80132

Hs.525198

Hs.146317

Hs.118118

Hs.729403

Hs.157287

Hs.399952

Hs.440384

Hs.418287

Species:

Human

Species Specific ID (Flybase ID):

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

siRNA Details

Gene Symbol: PHACTR4
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001048183.1	NP_001041648.1	14	5195
	NM_023923.3	NP_076412.3	13	5178

Gene Symbol: AASDH
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001323890.1	NP_001310819.1	12	2711

Gene Symbol: ASB18
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK123854.1	-	5	2149

Gene Symbol: CLCC1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001048210.2	NP_001041675.1	12	3655
	NM_001278202.1	NP_001265131.1	9	3163
	NM_001278203.1	NP_001265132.1	7	2971
	NM_015127.4	NP_055942.1	12	3515
GenBank mRNA	AB018304.2	-	11	3516
	AK090563.1	-	8	1718

Gene Symbol: DENND6A
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_152678.2	NP_689891.1	20	3603
	XM_006713019.3	XP_006713082.1	20	3629
	XM_006713020.2	XP_006713083.1	21	3835
	XM_017005864.1	XP_016861353.1	21	3838
GenBank mRNA	BC040291.1	-	20	3592	4822560

Gene Symbol: FBXO40
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_016298.3	NP_057382.2	4	3810
GenBank mRNA	AB033021.1	-	4	4015

Gene Symbol: FLJ43879
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NR_034162.1		4	2124
GenBank mRNA	AK125867.1	-	4	2124

Gene Symbol: GOSR1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK128816.1	-	2	1755

Gene Symbol: HDAC9
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001321868.1	NP_001308797.1	26	7098
	NM_001321877.1	NP_001308806.1	25	7028
	NM_001321897.1	NP_001308826.1	26	6925
	NM_178423.2	NP_848510.1	26	6982
	NM_178425.3	NP_848512.1	25	6846
	XM_011515629.2	XP_011513931.1	26	6940
	XM_011515631.2	XP_011513933.1	27	7254
	XM_011515634.2	XP_011513936.1	25	6808
	XM_011515635.2	XP_011513937.1	27	7806
	XM_011515636.2	XP_011513938.1	26	7527
	XM_011515637.2	XP_011513939.1	26	6951
	XM_011515638.2	XP_011513940.1	26	7521
	XM_011515639.2	XP_011513941.1	26	7718
	XM_011515641.2	XP_011513943.1	27	7803
	XM_011515642.2	XP_011513944.1	25	8532
	XM_011515644.2	XP_011513946.1	27	7778
	XM_011515645.2	XP_011513947.1	25	8517
	XM_011515646.2	XP_011513948.1	25	8508
	XM_011515648.2	XP_011513950.1	26	7536
	XM_011515649.2	XP_011513951.1	26	7740
	XM_017012826.1	XP_016868315.1	26	7512
	XM_017012827.1	XP_016868316.1	27	7595
	XM_017012828.1	XP_016868317.1	25	7588

Gene Symbol: HP09025
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NR_109783.1		2	2888
GenBank mRNA	AB593148.1	-	3	2786

Gene Symbol: JOSD1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_014876.5	NP_055691.1	4	1859
	XM_005261876.2	XP_005261933.1	5	2166
	XM_005261877.2	XP_005261934.1	5	2062
	XM_005261878.2	XP_005261935.1	5	2090
	XM_005261879.2	XP_005261936.1	5	2185
GenBank mRNA	BC015026.2	-	4	1693	3921785
	D31884.1	-	4	1671

Gene Symbol: KIAA1257
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AB033083.1	-	8	5123

Gene Symbol: LINC00963
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK057050.1	-	1	1189

Gene Symbol: LYPD4
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	XM_005278385.4	XP_005278442.1	6	3893
GenBank mRNA	BC034279.1	-	1	2042

Gene Symbol: NAF1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	XM_011532410.2	XP_011530712.1	1	1570

Gene Symbol: NFATC3
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK057574.1	-	1	459

Gene Symbol: NFS1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK091049.1	-	1	102

Gene Symbol: NUAK2
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_030952.2	NP_112214.2	7	2809
	XM_005245515.4	XP_005245572.1	3	2066
GenBank mRNA	AK074830.1	-	7	2763
	AL136891.1	-	7	2773
	BC017306.2	-	7	2745	5088037
	BX537564.1	-	1	5846
	CR749209.1	-	3	6238

Gene Symbol: OSBPL2
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001278649.1	NP_001265578.1	13	2788
	NM_014835.3	NP_055650.1	14	2931
	NM_144498.2	NP_653081.1	14	2967
	XM_017028165.1	XP_016883654.1	15	3272
	XM_017028167.1	XP_016883656.1	15	3035
	XM_017028170.1	XP_016883659.1	14	2901
GenBank mRNA	AB018315.1	-	14	2837
	AF392447.1	-	14	2928
	AY028168.1	-	14	2837

Gene Symbol: PDK3
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001142386.2	NP_001135858.1	12	5980

Gene Symbol: RDH13
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	XM_011526408.2	XP_011524710.1	7	2772
GenBank mRNA	AK096798.1	-	1	2178
	AL833150.1	-	2	741

Gene Symbol: RIN1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AB209445.1	-	7	4092

Gene Symbol: SLC22A5
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AB209484.1	-	2	3476

Gene Symbol: SMIM11A
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	BM989806.1	-	1	307

Gene Symbol: SNX15
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AB209439.1	-	6	1594

Gene Symbol: STIL
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001048166.1	NP_001041631.1	17	4539
	NM_001282936.1	NP_001269865.1	18	4745
	NM_001282937.1	NP_001269866.1	18	4694
	NM_001282938.1	NP_001269867.1	19	4607
	NM_001282939.1	NP_001269868.1	19	4418
	NM_003035.2	NP_003026.2	17	4536
	XM_011541996.2	XP_011540298.1	18	4398
	XM_011542001.2	XP_011540303.1	16	4288
	XM_017002123.1	XP_016857612.1	18	4395
	XM_017002124.1	XP_016857613.1	13	3815
GenBank mRNA	AK098445.1	-	1	1242
	CR749851.1	-	17	4514
	M74558.1	-	18	4761

Gene Symbol: TMEM170B
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001100829.2	NP_001094299.1	3	5120

Gene Symbol: TSPAN5
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AK126702.1	-	1	617

Gene Symbol: ZNF17
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
GenBank mRNA	AB075827.1	-	1	2889

Gene Symbol: ZNF578
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001099694.1	NP_001093164.1	6	3103
	XM_017026302.1	XP_016881791.1	6	3123

Gene Symbol: ZNF681
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_138286.2	NP_612143.2	4	3401

Gene Symbol: ZNF789
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	XM_017012019.1	XP_016867508.1	3	2260
	XM_017012020.1	XP_016867509.1	4	2413
	XM_017012025.1	XP_016867514.1	3	2260
GenBank mRNA	BC031249.1	-	4	2343

Gene Symbol: ZSCAN29
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_152455.3	NP_689668.3	5	3344
	XM_006720401.3	XP_006720464.1	6	4104
	XM_011521266.2	XP_011519568.1	6	3784
GenBank mRNA	AK098289.1	-	1	948
	AK123753.1	-	1	286
	BC017179.2	-	3	2211
	BC040682.1	-	3	2211
	DB183454.1	-	1	264

More Information

Additional Information:

This siRNA no longer meets our design criteria. We suggest you choose a different siRNA for this gene or contact Tech Support for more information.

Gene Ontology Categories:

Process(es)

neural crest cell migration
neural tube closure
Rho protein signal transduction
actin cytoskeleton organization
positive regulation of catalytic activity
enteric nervous system development
regulation of cell cycle
closure of optic fissure
negative regulation of integrin-mediated signaling pathway
fatty acid metabolic process
chloride transmembrane transport
positive regulation of GTPase activity
positive regulation of cell-cell adhesion mediated by cadherin
protein ubiquitination
muscle cell differentiation
negative regulation of transcription from RNA polymerase II promoter
response to amphetamine
transcription, DNA-templated
inflammatory response
heart development
chromatin modification
histone deacetylation
neuron differentiation
B cell differentiation
cellular response to insulin stimulus
peptidyl-lysine deacetylation
B cell activation
negative regulation of transcription, DNA-templated
regulation of skeletal muscle fiber development
regulation of striated muscle cell differentiation
histone H3 deacetylation
histone H4 deacetylation
positive regulation of cell migration involved in sprouting angiogenesis
protein deubiquitination
pseudouridine synthesis
rRNA processing
ribosome biogenesis
positive regulation of telomerase RNA localization to Cajal body
protein phosphorylation
apoptotic process
intracellular signal transduction
cellular response to glucose starvation
negative regulation of apoptotic process
lipid transport
glucose metabolic process
regulation of acetyl-CoA biosynthetic process from pyruvate
regulation of glucose metabolic process
peptidyl-serine phosphorylation
peroxisome proliferator activated receptor signaling pathway
cellular response to glucose stimulus
cellular response to fatty acid
hypoxia-inducible factor-1alpha signaling pathway
regulation of reactive oxygen species metabolic process
response to high light intensity
retina layer formation
eye photoreceptor cell development
retinol metabolic process
oxidation-reduction process
embryonic axis specification
in utero embryonic development
heart looping
mitotic spindle organization
smoothened signaling pathway
determination of left/right symmetry
cell proliferation
neural tube development
forebrain development
notochord development
floor plate development
multicellular organism growth
regulation of centriole replication
centrosome duplication
protein localization to centrosome
regulation of transcription, DNA-templated
positive regulation of defense response to virus by host
xenophagy
regulation of transcription from RNA polymerase II promoter

Function(s)

actin binding
protein phosphatase 1 binding
protein phosphatase type 1 activator activity
ATP binding
acid-thiol ligase activity
chloride channel activity
Rab guanyl-nucleotide exchange factor activity
molecular_function
zinc ion binding
ubiquitin protein ligase activity
transcription corepressor activity
histone deacetylase activity
protein kinase C binding
protein binding
transcription factor binding
NAD-dependent histone deacetylase activity (H3-K14 specific)
protein deacetylase activity
histone deacetylase binding
metal ion binding
repressing transcription factor binding
thiol-dependent ubiquitin-specific protease activity
omega peptidase activity
RNA binding
poly(A) RNA binding
telomerase RNA binding
magnesium ion binding
protein serine/threonine kinase activity
cholesterol binding
protein kinase activity
pyruvate dehydrogenase (acetyl-transferring) kinase activity
oxidoreductase activity
NADP-retinol dehydrogenase activity
DNA binding
transcription factor activity, sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding