s29339

• Gene Symbol: RBFOX1
• Gene Name: RNA binding protein, fox-1 homolog 1
• Gene Aliases: 2BP1, A2BP1, FOX-1, FOX1, HRNBP1
• Chromosome Location: Chr.16: 5239749 - 7713343 on Build GRCh38
• UniGene ID: Hs.459842
• Species: Human
• Species Specific ID (Flybase ID): -

siRNA Details

Gene Symbol: RBFOX1
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_001142333.1	NP_001135805.1	7, 8	1466
	NM_001142334.1	NP_001135806.1	5, 6	698
	NM_001308117.1	NP_001295046.1	7, 8	803
	NM_018723.3	NP_061193.2	7, 8	1466
	NM_145891.2	NP_665898.1	4, 5	790
	NM_145892.2	NP_665899.1	4, 5	790
	NM_145893.2	NP_665900.1	4, 5	790
	XM_005255386.3	XP_005255443.1	4, 5	716
	XM_005255387.3	XP_005255444.1	4, 5	695
	XM_005255388.4	XP_005255445.1	4, 5	751
	XM_005255390.3	XP_005255447.1	7, 8	1588
	XM_005255391.3	XP_005255448.1	6, 7	598
	XM_005255394.4	XP_005255451.1	4, 5	695
	XM_011522546.2	XP_011520848.1	4, 5	695
	XM_011522547.2	XP_011520849.1	4, 5	695
	XM_011522548.2	XP_011520850.1	4, 5	695
	XM_017023318.1	XP_016878807.1	8, 9	1093
	XM_017023319.1	XP_016878808.1	10, 11	1089
	XM_017023320.1	XP_016878809.1	7, 8	1497
	XM_017023321.1	XP_016878810.1	6, 7	2559
	XM_017023322.1	XP_016878811.1	6, 7	2559
	XM_017023323.1	XP_016878812.1	4, 5	716
	XM_017023324.1	XP_016878813.1	7, 8	1497
	XM_017023325.1	XP_016878814.1	5, 6	1095
	XM_017023326.1	XP_016878815.1	7, 8	1588
	XM_017023327.1	XP_016878816.1	4, 5	716
	XM_017023328.1	XP_016878817.1	7, 8	1497
	XM_017023329.1	XP_016878818.1	7, 8	1497
	XM_017023330.1	XP_016878819.1	6, 7	2036
	XM_017023331.1	XP_016878820.1	4, 5	2502
	XM_017023332.1	XP_016878821.1	4, 5	716
	XM_017023333.1	XP_016878822.1	6, 7	598
	XM_017023334.1	XP_016878823.1	4, 5	716
	XM_017023335.1	XP_016878824.1	7, 8	1588
	XM_017023336.1	XP_016878825.1	6, 7	598
	XM_017023337.1	XP_016878826.1	4, 5	716
	XM_017023338.1	XP_016878827.1	6, 7	598
	XM_017023339.1	XP_016878828.1	4, 5	742
	XM_017023341.1	XP_016878830.1	7, 8	1588
	XM_017023342.1	XP_016878831.1	6, 7	598
	XM_017023343.1	XP_016878832.1	4, 5	745
GenBank mRNA	AB208826.1	-		1500
	AF094849.1	-	4, 5	791
	AF107203.1	-	7, 8	1464
	AF109106.1	-	4, 5	791
	AF229057.1	-	4, 5	793
	AF448859.1	-	7, 8	1464
	AK001027.1	-	5, 6	698
	AK293951.1	-	7, 8	803
	AL713700.1	-	6, 7	1313
	BC113691.1	-	4, 5	584	8322743
	BC143816.1	-	4, 5	584
	KJ534926.1	-	4, 5	538
	KJ535000.1	-	4, 5	538
	KJ535001.1	-	4, 5	538

More Information

Other Species Targeted

This siRNA also targets the following transcripts in Rat: NM_001106974, XM_006245774.
This siRNA also targets the following transcripts in Mouse: NM_021477, NM_183188, AY659954, AB041596, AY659955, and others.

Gene Ontology Categories:

Process(es)

regulation of alternative mRNA splicing, via spliceosome
mRNA processing
nervous system development
RNA splicing
RNA transport

Function(s)

nucleotide binding
RNA binding
mRNA binding
protein binding
protein C-terminus binding