Name: [Hs01019738_m1] [MYO15B]
Creator: Thermo Fisher Scientific
Keywords: [MYO15B] Assay, [myosin XVB] Assay

Assay Details

Gene Symbol: MYO15B
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001309242.1	NP_001296171.1	42 - 43	6870		76
	XM_017025120.1	XP_016880609.1	44 - 45	6577		76
	XM_017025121.1	XP_016880610.1	44 - 45	6562		76
	XM_017025122.1	XP_016880611.1	44 - 45	6541		76
	XM_017025123.1	XP_016880612.1	44 - 45	6579		76
	XM_017025124.1	XP_016880613.1	43 - 44	6451		76
	XM_017025125.1	XP_016880614.1	42 - 43	6300		76
	XM_017025126.1	XP_016880615.1	39 - 40	6042		76
	XM_017025127.1	XP_016880616.1	42 - 43	5885		76
	XM_017025128.1	XP_016880617.1	43 - 44	5631		76
	XM_017025129.1	XP_016880618.1	42 - 43	4863		76
	XM_017025130.1	XP_016880619.1	41 - 42	4819		76
	XM_017025131.1	XP_016880620.1	40 - 41	5258		76
	XM_017025132.1	XP_016880621.1	39 - 40	5199		76
	XM_017025133.1	XP_016880622.1	37 - 38	4724		76
	XM_017025134.1	XP_016880623.1	38 - 39	5085		76
	XM_017025135.1	XP_016880624.1	32 - 33	3741		76
	XM_017025136.1	XP_016880625.1	32 - 33	4090		76
	XM_017025137.1	XP_016880626.1	29 - 30	3635		76
	XM_017025138.1	XP_016880627.1	24 - 25	3131		76
	XM_017025139.1	XP_016880628.1	25 - 26	2932		76
	XM_017025140.1	XP_016880629.1	22 - 23	2745		76
	XM_017025143.1	XP_016880632.1	17 - 18	2022		76
	XM_017025144.1	XP_016880633.1	38 - 39	6505		76
GenBank mRNA	AB058686.1	-	32 - 33	4977		76
	AF418286.1	-	38 - 39	6887		76
	AF418290.1	-	37 - 38	7297		76
	AK025259.1	-		1038		76
	AK097896.1	-	10 - 11	1346		76

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	CR984271.1	-	2 - 3	156	Chr. 17 - 75617824 - 75620358 [+] on Build GRCh38	76
GenBankmRNA	DB138051.1	-	3 - 4	205	Chr. 17 - 75617270 - 75619805 [+] on Build GRCh38	76
GenBankmRNA	EL954657.1	-	4 - 5	460	Chr. 17 - 75616913 - 75619386 [+] on Build GRCh38	76
GenBankmRNA	DA316903.1	-	3 - 4	350	Chr. 17 - 75617125 - 75619454 [+] on Build GRCh38	76
GenBankmRNA	BI766913.1	-		522	Chr. - - [-] on Build	76
GenBankmRNA	CR986155.1	-	3 - 4	308	Chr. 17 - 75617167 - 75619796 [+] on Build GRCh38	76
GenBankmRNA	DA304564.1	-	2 - 3	166	Chr. 17 - 75617814 - 75619957 [+] on Build GRCh38	76
GenBankmRNA	DN831532.1	-			Chr. - - [-] on Build	76
GenBankmRNA	DB134005.1	-	2 - 3	137	Chr. 17 - 75617843 - 75619964 [+] on Build GRCh38	76
GenBankmRNA	DA109947.1	-	2 - 3	501	Chr. 17 - 75617496 - 75619182 [+] on Build GRCh38	76
GenBankmRNA	DA428235.1	-	3 - 4	280	Chr. 17 - 75617580 - 75619565 [+] on Build GRCh38	76
GenBankmRNA	BI772088.1	-		423	Chr. - - [-] on Build	76
GenBankmRNA	DB138105.1	-	3 - 4	205	Chr. 17 - 75617270 - 75619805 [+] on Build GRCh38	76
GenBankmRNA	DA126806.1	-	5 - 6	552	Chr. 17 - 75616712 - 75619177 [+] on Build GRCh38	76
GenBankmRNA	BY798869.2	-	2 - 3	174	Chr. 17 - 75617810 - 75619955 [+] on Build GRCh38	76
GenBankmRNA	BI769659.1	-	5 - 6	562	Chr. 17 - 75616699 - 75619377 [+] on Build GRCh38	76

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	LLGL2, scribble cell polarity complex component	LLGL2	HGL, Hugl-2, LGL2	-42.9kb	Sense	Chr. 17 - 75525080 - 75575209 on NCBI Build GRCh38
Downstream	RecQ like helicase 5	RECQL5	RECQ5	7.6kb	Anti-sense	Chr. 17 - 75626845 - 75667202 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700008912.hg.1

Set Membership:

Amplicon length between 71 and 85

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000577342.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000577785.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000578300.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000578960.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000610510.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000612587.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000619501.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000621743.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000633867.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	NM_001309242.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	TC1700008912.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000577342.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000577785.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000578300.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000578960.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000610510.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000612587.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000619501.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000621743.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	ENST00000633867.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700166934.hg.1	NM_001309242.1	Refseq

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