APOC1
Genomic Map
Back To TopAssay Details
| Gene Symbol: APOC1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001321065.1 | NP_001307994.1 | 2 - 3 | 324 | 98 | |
| NM_001321066.1 | NP_001307995.1 | 3 - 4 | 386 | 98 | ||
| NM_001645.4 | NP_001636.1 | 2 - 3 | 260 | 98 | ||
| GenBank mRNA | AI310334.1 | - | 2 - 3 | 98 | ||
| AI885116.1 | - | 2 - 3 | 98 | |||
| AK312036.1 | - | 2 - 3 | 141 | 98 | ||
| BC009698.2 | - | 1 - 2 | 83 | 3889900 | 98 | |
| BC055093.1 | - | 3 - 4 | 312 | 6567705 | 98 | |
| BT007142.1 | - | 1 - 2 | 61 | 98 | ||
| CR456907.1 | - | 1 - 2 | 61 | 98 | ||
| DA482306.1 | - | 3 - 4 | 386 | 98 | ||
| X00570.1 | - | 1 - 2 | 117 | 98 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1900011759.hg.1This assay targets the same location as HTA transcript cluster(s) TC19000634.hg.1
Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
Mammalian Gene Collection
Homo sapiens
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
lipid metabolic process
triglyceride metabolic process
cholesterol metabolic process
positive regulation of cholesterol esterification
negative regulation of phosphatidylcholine catabolic process
negative regulation of very-low-density lipoprotein particle clearance
regulation of cholesterol transport
negative regulation of cholesterol transport
cholesterol efflux
phospholipid efflux
plasma lipoprotein particle remodeling
high-density lipoprotein particle remodeling
very-low-density lipoprotein particle assembly
chylomicron remnant clearance
very-low-density lipoprotein particle clearance
lipoprotein metabolic process
positive regulation of catalytic activity
negative regulation of fatty acid biosynthetic process
negative regulation of lipid metabolic process
negative regulation of receptor-mediated endocytosis
negative regulation of lipid catabolic process
negative regulation of lipoprotein lipase activity
phospholipase inhibitor activity
fatty acid binding
phosphatidylcholine binding
lipase inhibitor activity
phosphatidylcholine-sterol O-acyltransferase activator activity
lipid metabolic process
triglyceride metabolic process
cholesterol metabolic process
positive regulation of cholesterol esterification
negative regulation of phosphatidylcholine catabolic process
negative regulation of very-low-density lipoprotein particle clearance
regulation of cholesterol transport
negative regulation of cholesterol transport
cholesterol efflux
phospholipid efflux
plasma lipoprotein particle remodeling
high-density lipoprotein particle remodeling
very-low-density lipoprotein particle assembly
chylomicron remnant clearance
very-low-density lipoprotein particle clearance
lipoprotein metabolic process
positive regulation of catalytic activity
negative regulation of fatty acid biosynthetic process
negative regulation of lipid metabolic process
negative regulation of receptor-mediated endocytosis
negative regulation of lipid catabolic process
negative regulation of lipoprotein lipase activity
phospholipase inhibitor activity
fatty acid binding
phosphatidylcholine binding
lipase inhibitor activity
phosphatidylcholine-sterol O-acyltransferase activator activity
MicroArray Probes:
Affymetrix
ABI
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000589078.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000589078.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000589078.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000589781.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000589781.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000589781.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011759.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008823.hg.1 | ENST00000252491.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008823.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008823.hg.1 | TC19000634.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008819.hg.1 | ENST00000252491.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008819.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008819.hg.1 | TC19000634.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008824.hg.1 | ENST00000252491.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008824.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008824.hg.1 | TC19000634.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008821.hg.1 | ENST00000252491.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008821.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR19008821.hg.1 | TC19000634.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000589078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000589781.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | TC1900011759.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000589078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000589781.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201559.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1900201544.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201544.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201544.hg.1 | TC1900011759.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1900201544.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201544.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000589078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000589078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000589078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000589781.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000589781.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000589781.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Clariom D Assay | TC1900011759.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000589078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | NM_001645.4 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | TC1900011759.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000586638.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000588750.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000588802.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000589078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000590334.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000592176.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000592535.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | ENST00000592885.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900201561.hg.1 | NM_001645.4 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Human Genome Survey Microarray Version 2.0 | 175573 | - | - |
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