SNORA65
Genomic Map
Back To TopAssay Details
| Gene Symbol: SNORA65 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_002449.2 | 1 | 72 | 87 | ||
| GenBank mRNA | Y11159.1 | - | 1 | 72 | 87 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | zinc finger protein 79 | ZNF79 | pT7 | -1.5kb | Anti-sense | Chr. 9 - 127424374 - 127446289 on NCBI Build GRCh38 |
| Downstream | leucine rich repeat and sterile alpha motif containing 1 | LRSAM1 |
CMT2P, RIFLE, TAL |
2.8kb | Anti-sense | Chr. 9 - 127451486 - 127503501 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0900011577.hg.1This assay targets the same location as HTA transcript cluster(s) TC09001602.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_3782 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_3783 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_19_P00323671 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969398 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969397 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969399 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27315457 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27315442 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969389 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969395 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27315465 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969391 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969393 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969390 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969387 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969400 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969386 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969387 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27315465 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969400 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27315442 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969399 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969393 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969397 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969386 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969390 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969389 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969398 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969391 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P27315457 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06969395 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969408 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969432 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969385 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969402 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969411 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16264610 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16264600 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969409 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969405 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969389 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969418 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969421 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969423 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969431 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969390 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969398 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16264599 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969387 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969413 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969415 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969427 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969391 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969436 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969395 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969407 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969424 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969429 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969400 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969393 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969384 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969433 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969404 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16264594 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06969419 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_002449_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8164216 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 8164215 | - | - |
| Affymetrix HT HG-U133+ PM Array Plate | 1558081_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11757134_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11757134_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR09020095.hg.1 | TC09001602.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR09020095.hg.1 | ENST00000364432.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR09020095.hg.1 | NR_002449.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011577.hg.1 | ENST00000364432.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900011577.hg.1 | NR_002449.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900178904.hg.1 | ENST00000364432.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900178904.hg.1 | NR_002449.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900178904.hg.1 | ENST00000364432.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900178904.hg.1 | NR_002449.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900178904.hg.1 | TC0900011577.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0900011577.hg.1 | ENST00000364432.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900011577.hg.1 | NR_002449.2 | Refseq |
| Human Genome U133 Plus 2.0 Array | 1558081_at | - | - |
| Human Genome U133 Plus 2.0 Array | 1558081_PM_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1558081_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1558081_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1558081_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1558081_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1558081_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1558081_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1558081_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1558081_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1558081_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1558081_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1558081_at5 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_1787326 | NR_002449.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_1787326 | Y11159.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1787326 | NR_002449.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1787326 | Y11159.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_1787326 | NR_002449.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_1787326 | Y11159.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_1787326 | NR_002449.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_1787326 | Y11159.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_1787326 | NR_002449.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_1787326 | Y11159.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1787326 | NR_002449.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1787326 | Y11159.1 | human_transcriptome |
| Illumina Sentrix Human-6 v2 Expression BeadChip | 1050414 | - | - |
| Illumina HumanRef-6 v2.0 expression beadchip | ILMN_20807 | - | - |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1787326 | NR_002449.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1787326 | Y11159.1 | human_transcriptome |
| Illumina HumanHT-12 V3.0 expression beadchip | ILMN_1787326 | NR_002449.1 | human_transcriptome |
| Illumina HumanHT-12 V3.0 expression beadchip | ILMN_1787326 | Y11159.1 | human_transcriptome |
| Illumina HumanWG-6_V2_0_R2 | ILMN_1787326 | NR_002449.1 | human_transcriptome |
| Illumina HumanWG-6_V2_0_R2 | ILMN_1787326 | Y11159.1 | human_transcriptome |
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