SNORA55
Genomic Map
Back To TopAssay Details
| Gene Symbol: SNORA55 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_002983.1 | 1 | 69 | 105 | ||
| GenBank mRNA | AJ609480.1 | - | 1 | 69 | 105 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | uncharacterized LOC101929516 | LOC101929516 | Anti-sense | Chr. 1 - 39565070 - 39573203 on NCBI Build GRCh38 | ||
| Downstream | hes related family bHLH transcription factor with YRPW motif-like | HEYL |
HESR3, HEY3, HRT3, bHLHb33 |
55.9kb | Sense | Chr. 1 - 39623431 - 39639676 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0100013797.hg.1This assay targets the same location as HTA transcript cluster(s) TC01002542.hg.1
Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_3991 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152334 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152322 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152271 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152325 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176420 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176382 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176395 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152307 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176365 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152302 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176429 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152287 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152288 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176412 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176393 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152343 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152291 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176403 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152339 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152279 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152274 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176406 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176392 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152306 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176368 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176401 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176372 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176396 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152329 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152298 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152304 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176415 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152285 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152327 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152316 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176364 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152342 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152289 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176388 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152294 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152275 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176416 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152286 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152282 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152323 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152332 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152310 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152293 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176395 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152274 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152316 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176416 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176364 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176406 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152294 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152279 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152285 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152307 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176429 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152288 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152339 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152306 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152310 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152286 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176412 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152343 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152322 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152271 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152275 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176396 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152289 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176365 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176393 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152342 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176388 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152282 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176415 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152293 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152323 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152332 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176368 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152298 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152304 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152291 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152325 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152334 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176403 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152327 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176372 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176382 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176420 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152329 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176401 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20176392 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152287 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00152302 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152282 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152273 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152331 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152207 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152300 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152320 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152309 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152204 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152288 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152307 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152339 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15051502 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152329 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152321 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152291 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152305 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152285 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152312 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152327 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152325 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152196 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152334 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152199 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152302 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15051506 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152205 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152202 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152279 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152342 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152318 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152271 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152209 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152272 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152341 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152323 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152343 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152316 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152297 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152281 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152336 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152294 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152277 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152275 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152295 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00152211 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_002983_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 7915228 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 7915227 | - | - |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013797.hg.1 | ENST00000364587.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100013797.hg.1 | NR_002983.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR01039571.hg.1 | ENST00000364587.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01039571.hg.1 | NR_002983.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR01039571.hg.1 | TC01002542.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | TC0100013797.hg.1 | ENST00000364587.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100013797.hg.1 | NR_002983.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100203184.hg.1 | ENST00000364587.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100203184.hg.1 | NR_002983.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100203184.hg.1 | TC0100013797.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100203184.hg.1 | NR_002983.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100203184.hg.1 | ENST00000364587.1 | Ensembl |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3238745 | NR_002983.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3238745 | AJ609480.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3238745 | NR_002983.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3238745 | AJ609480.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3238745 | NR_002983.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3238745 | AJ609480.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3238745 | NR_002983.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3238745 | AJ609480.1 | human_transcriptome |
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