SCARNA8
Genomic Map
Back To TopAssay Details
| Gene Symbol: SCARNA8 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_003009.1 | 1 | 62 | 68 | ||
| GenBank mRNA | AY077742.1 | - | 1 | 62 | 68 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | HAUS augmin like complex subunit 6 | HAUS6 |
Dgt6, FAM29A |
Sense | Chr. 9 - 19053137 - 19102942 on NCBI Build GRCh38 | |
| Downstream | perilipin 2 | PLIN2 |
ADFP, ADRP |
44.6kb | Sense | Chr. 9 - 19108391 - 19127606 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0900009646.hg.1This assay targets the same location as HTA transcript cluster(s) TC09000934.hg.1
Set Membership: |
Amplicon length less than or equal to 70
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4032 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4033 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628039 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915944 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915952 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915915 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915912 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915924 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915948 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915936 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915931 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628012 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915945 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628027 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915939 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628011 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628026 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915921 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628005 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915925 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915953 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915932 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915941 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915929 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915947 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915949 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915935 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915909 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915923 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915914 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915928 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915922 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915940 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628014 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915946 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915950 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915938 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628036 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915937 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915954 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915933 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915912 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915948 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628036 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915952 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915922 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915924 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915936 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915949 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628027 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915932 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915937 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915939 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915946 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915941 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915950 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628005 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915954 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915938 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915914 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628039 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915915 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915945 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915928 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915925 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915947 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915909 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915921 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915953 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915923 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915929 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915935 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628026 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628012 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915933 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915940 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628011 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915944 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26915931 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06628014 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628013 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16163520 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628019 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628017 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628038 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628041 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628028 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628043 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628030 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628005 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628033 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628025 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16163517 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16163522 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628006 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628010 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628021 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628052 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628008 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628045 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628049 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628037 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628039 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628015 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628050 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628047 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06628011 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_003009_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8160296 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 8160295 | - | - |
| Affymetrix Human Transcriptome Array 2.0 | TC0900009646.hg.1 | ENST00000515924.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0900009646.hg.1 | NR_003009.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR09012497.hg.1 | ENST00000515924.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR09012497.hg.1 | NR_003009.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR09012497.hg.1 | TC09000934.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | TC0900009646.hg.1 | ENST00000515924.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0900009646.hg.1 | NR_003009.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900166067.hg.1 | ENST00000515924.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900166067.hg.1 | NR_003009.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900166067.hg.1 | TC0900009646.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0900166067.hg.1 | NR_003009.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900166067.hg.1 | ENST00000515924.1 | Ensembl |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A037151 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A037151 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3247159 | NR_003009.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3247159 | AY077742.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3247159 | NR_003009.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3247159 | AY077742.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3247159 | NR_003009.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3247159 | AY077742.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3247159 | NR_003009.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3247159 | AY077742.1 | human_transcriptome |
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