SNORD71
Genomic Map
Back To TopAssay Details
| Gene Symbol: SNORD71 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_003059.1 | 1 | 42 | 66 | ||
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Transcript Location | Amplicon Length | |
|---|---|---|---|---|---|---|---|
| GenBankmRNA | BG538229.1 | - | 37 | Chr. - - [-] on Build | 66 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | PH domain and leucine rich repeat protein phosphatase 2 | PHLPP2 |
PHLPPL, PPM3B |
-33.7kb | Sense | Chr. 16 - 71644924 - 71724701 on NCBI Build GRCh38 |
| Downstream | ataxin 1 like | ATXN1L |
BOAT, BOAT1 |
87.5kb | Anti-sense | Chr. 16 - 71845991 - 71857333 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1600010795.hg.1This assay targets the same location as HTA transcript cluster(s) TC16001253.hg.1
Set Membership: |
Amplicon length less than or equal to 70
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4088 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643004 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643022 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642986 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643016 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643007 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642985 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642989 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642998 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643001 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101541 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101579 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642987 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642984 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642994 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642980 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642988 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101545 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643020 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643010 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643014 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643006 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643013 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643019 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101557 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101548 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643003 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643009 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643011 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642982 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642995 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642991 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642992 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643012 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642997 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101543 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101579 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642984 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643010 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642989 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642995 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101541 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642992 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643016 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101548 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101543 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642998 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643020 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643014 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643007 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101557 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642997 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643001 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642994 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642986 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643011 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642991 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642982 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643009 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642980 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10101545 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643019 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643004 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643012 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643006 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643013 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643003 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642987 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642985 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30642988 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30643022 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101574 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101572 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101556 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101549 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101577 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101580 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101553 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101564 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101565 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101591 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101589 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101558 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101582 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101593 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101586 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16911142 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101547 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101569 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101542 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101555 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101551 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101561 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101563 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10101588 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | TC1600010795.hg.1 | ENST00000411292.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600010795.hg.1 | NR_003059.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR16017443.hg.1 | ENST00000411292.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR16017443.hg.1 | NR_003059.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR16017443.hg.1 | TC16001253.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR1600183797.hg.1 | ENST00000411292.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1600183797.hg.1 | NR_003059.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1600183797.hg.1 | ENST00000411292.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1600183797.hg.1 | NR_003059.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1600183797.hg.1 | TC1600010795.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC1600010795.hg.1 | ENST00000411292.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600010795.hg.1 | NR_003059.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3239272 | NR_003059.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3239272 | NR_003059.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3239272 | NR_003059.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3239272 | NR_003059.1 | human_transcriptome |
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