SNORD119
Genomic Map
Back To TopAssay Details
| Gene Symbol: SNORD119 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_003684.1 | 1 | 46 | 93 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | transglutaminase 6 | TGM6 |
SCA35, TG6, TGM3L, TGY, dJ734P14.3 |
-30.2kb | Anti-sense | Chr. 20 - 2380908 - 2432753 on NCBI Build GRCh38 |
| Downstream | zinc finger protein 343 | ZNF343 | dJ734P14.5 | 17.0kb | Sense | Chr. 20 - 2481817 - 2524522 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC2000008185.hg.1This assay targets the same location as HTA transcript cluster(s) TC20000561.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4242 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667740 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667716 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021619 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667727 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667720 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021638 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667746 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667771 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667730 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021643 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667756 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021631 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667742 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021603 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667723 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667728 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667763 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021596 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021622 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667758 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021621 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021593 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17168359 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021634 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17168364 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667743 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021625 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667767 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021633 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021615 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667733 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021594 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021607 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021605 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667754 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021642 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667755 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667732 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667739 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667742 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021607 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021593 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021603 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667727 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667754 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021605 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667767 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667740 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667728 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667756 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667723 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667771 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667733 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021615 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021621 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667720 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667763 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021596 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021625 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667739 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021643 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667730 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021634 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667755 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667743 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021594 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667732 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17168359 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021638 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17168364 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021622 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667746 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021619 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021642 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667758 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021633 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11021631 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31667716 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021598 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17168359 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17168361 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021600 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021611 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021613 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17168357 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021638 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021632 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021625 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021619 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021590 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021617 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021629 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021644 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021602 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021640 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021621 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17168364 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021605 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021609 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17168362 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021594 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021592 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021596 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021642 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021645 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11021634 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR20008133.hg.1 | TC20000561.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR20008133.hg.1 | ENST00000515997.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR20008133.hg.1 | NR_003684.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR2000157665.hg.1 | NR_003684.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR2000157665.hg.1 | TC2000008185.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR2000157665.hg.1 | NR_003684.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3245376 | NR_003684.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3245376 | NR_003684.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3245376 | NR_003684.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3245376 | NR_003684.1 | human_transcriptome |
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