SNORD121A
Genomic Map
Back To TopAssay Details
| Gene Symbol: SNORD121A | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_003685.1 | 1 | 39 | 90 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream |
small nucleolar RNA, C/D box 121B |
SNORD121B | -18.4kb | Sense | Chr. 9 - 33934297 - 33934375 on NCBI Build GRCh38 | |
| Downstream | DDB1 and CUL4 associated factor 12 | DCAF12 |
CT102, KIAA1892, TCC52, WDR40A |
133.5kb | Sense | Chr. 9 - 34086383 - 34126773 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0900009876.hg.1This assay targets the same location as HTA transcript cluster(s) TC09001026.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4243 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692672 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981595 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692660 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692689 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692685 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981612 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981606 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981565 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981586 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981596 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981580 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981602 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692699 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981584 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981587 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692670 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981591 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981581 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981607 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981563 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692703 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981575 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981578 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981579 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692702 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981576 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981574 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981614 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981577 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981598 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981604 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16173004 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981594 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981609 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981569 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981603 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981604 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981598 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692703 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692699 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981581 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981591 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16173004 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692672 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981595 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981577 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981606 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692660 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981586 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981563 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981602 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981614 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981574 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981612 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981580 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981565 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692702 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692689 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692670 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981587 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981579 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981609 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981576 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981578 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981603 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981607 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981596 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P06692685 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981594 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981569 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981584 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P26981575 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692672 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692700 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692707 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692681 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692691 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692696 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692674 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692711 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692665 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692709 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692713 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692661 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692698 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692679 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692668 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692694 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692685 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692703 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692683 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692680 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692670 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692677 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692686 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692689 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692687 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692690 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692716 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P06692682 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR09013474.hg.1 | TC09001026.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR09013474.hg.1 | ENST00000459386.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR09013474.hg.1 | NR_003685.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900167679.hg.1 | ENST00000459386.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900167679.hg.1 | NR_003685.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900167679.hg.1 | ENST00000459386.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0900167679.hg.1 | NR_003685.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0900167679.hg.1 | TC0900009876.hg.1 | Clariom D TC |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3246715 | NR_003685.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3246715 | NR_003685.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3246715 | NR_003685.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3246715 | NR_003685.1 | human_transcriptome |
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