SNORD125
Genomic Map
Back To TopAssay Details
| Gene Symbol: SNORD125 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_003686.1 | 1 | 55 | 76 | ||
| Gene Symbol: MIR3653 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_037426.1 | 1 | 64 | 76 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | RAS like family 10 member A | RASL10A | RRP22 | -13.5kb | Sense | Chr. 22 - 29312933 - 29319618 on NCBI Build GRCh38 |
| Downstream | ret finger protein like 1 | RFPL1 | RNF78 | 101.3kb | Anti-sense | Chr. 22 - 29403031 - 29442491 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.This assay targets the same location as Clariom D transcript cluster(s) TC2200008399.hg.1
This assay targets the same location as HTA transcript cluster(s) TC22000635.hg.1
Set Membership: |
Amplicon length between 71 and 85
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4244 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465679 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465653 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465654 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465695 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465657 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465687 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465689 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465688 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146679 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465655 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465661 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465680 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465668 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146643 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465701 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465658 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465682 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465699 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146639 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465673 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17273950 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146641 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465681 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465675 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465691 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465685 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465694 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465663 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465666 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146656 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146693 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465671 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146660 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465674 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465677 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465692 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465676 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465651 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465656 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465677 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465680 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465663 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465694 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465655 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465675 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465673 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465657 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465651 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146660 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465701 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465676 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465653 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465699 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465674 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465681 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465682 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465689 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465666 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465671 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465685 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146656 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146693 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146641 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146643 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465656 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465654 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146679 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465679 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465658 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465695 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P32146639 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465661 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465692 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465668 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17273950 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465687 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465691 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11465688 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17273950 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465699 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465666 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17273948 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465692 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465661 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465687 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465657 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465663 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465679 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465706 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465694 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465649 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465701 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465683 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465696 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465655 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465674 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465659 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465703 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465708 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465680 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465688 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465685 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465664 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465676 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465668 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465690 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465695 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465647 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465673 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465682 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465658 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465677 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465656 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465707 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465651 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11465671 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | TC2200008399.hg.1 | ENST00000459538.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC2200008399.hg.1 | ENST00000625572.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC2200008399.hg.1 | NR_003686.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC2200008399.hg.1 | NR_037426.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR22011061.hg.1 | TC22000635.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR22011061.hg.1 | ENST00000459538.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR22011061.hg.1 | NR_003686.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR22011061.hg.1 | NR_037426.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR2200160123.hg.1 | ENST00000459538.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR2200160123.hg.1 | ENST00000625572.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR2200160123.hg.1 | NR_003686.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR2200160123.hg.1 | NR_037426.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR2200160123.hg.1 | TC2200008399.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR2200160123.hg.1 | NR_037426.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR2200160123.hg.1 | ENST00000459538.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR2200160123.hg.1 | ENST00000625572.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR2200160123.hg.1 | NR_003686.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC2200008399.hg.1 | ENST00000459538.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC2200008399.hg.1 | ENST00000625572.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC2200008399.hg.1 | NR_003686.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC2200008399.hg.1 | NR_037426.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3249543 | NR_037426.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3249543 | NR_003686.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3249543 | NR_037426.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3249543 | NR_003686.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3249543 | NR_037426.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3249543 | NR_003686.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3249543 | NR_037426.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3249543 | NR_003686.1 | human_transcriptome |
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