SNORA2A
Genomic Map
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| Gene Symbol: SNORA2A | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_002950.1 | 1 | 70 | 108 | ||
| GenBank mRNA | AJ609426.1 | - | 1 | 70 | 108 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | microRNA 1291 | MIR1291 |
MIRN1291, hsa-mir-1291, mir-1291 |
-2.1kb | Sense | Chr. 12 - 48654444 - 48654530 on NCBI Build GRCh38 |
| Downstream |
small nucleolar RNA, H/ACA box 2B |
SNORA2B | ACA2b | 10.7kb | Sense | Chr. 12 - 48667457 - 48667593 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1200010590.hg.1This assay targets the same location as HTA transcript cluster(s) TC12001454.hg.1
Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_3945 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_3946 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773058 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773056 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338715 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773073 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338701 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773067 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338712 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773083 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773063 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773076 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773064 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338688 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338702 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773060 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773078 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338695 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773066 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773062 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773084 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773057 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773077 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773088 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773069 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773061 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773064 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773078 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338712 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773088 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773061 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773067 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773063 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773062 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773083 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773056 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338715 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773077 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773066 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773057 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773060 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338702 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773073 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338701 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338695 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773084 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773076 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773069 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08338688 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28773058 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338711 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338717 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338705 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338678 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338676 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338709 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338692 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338713 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338703 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338690 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338699 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338672 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338669 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338701 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338707 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338674 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338694 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338685 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338715 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338687 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338719 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08338697 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_002950_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 7962828 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 7962827 | - | - |
| Affymetrix Human Genome U219 Array | 11757118_at | - | - |
| Affymetrix Human Genome U219 Array | 11757118_PM_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR12019013.hg.1 | ENST00000383885.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR12019013.hg.1 | NR_002950.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR12019013.hg.1 | TC12001454.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0200011710.hg.1 | ENST00000383920.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1200010590.hg.1 | ENST00000383885.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1200010590.hg.1 | NR_002950.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1200180145.hg.1 | ENST00000383885.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1200180145.hg.1 | NR_002950.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1200180145.hg.1 | TC1200010590.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1200180145.hg.1 | NR_002950.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1200180145.hg.1 | ENST00000383885.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1200010590.hg.1 | ENST00000383885.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1200010590.hg.1 | NR_002950.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0200011710.hg.1 | ENST00000383920.1 | Ensembl |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3248232 | NR_002950.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3248232 | AJ609426.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3248232 | NR_002950.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3248232 | AJ609426.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3248232 | NR_002950.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3248232 | AJ609426.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3248232 | NR_002950.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3248232 | AJ609426.1 | human_transcriptome |
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