Name: [Hs03655144_s1] [LOC646976]
Creator: Thermo Fisher Scientific
Keywords: [LOC646976] Assay, [translation initiation factor IF-2] Assay

Assay Details

Gene Symbol: LOC646976
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	AK096082.1	-	1	153		84

Gene Symbol: RALGPS2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_006711410.3	XP_006711473.1	1			84

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AI524733.1	-	1	411	Chr. 1 - 178726074 - 178726543 [-] on Build GRCh38	84
GenBankmRNA	DB059732.1	-	1		Chr. 1 - 178726020 - 178808083 [+] on Build GRCh38	84
GenBankmRNA	DB040618.1	-	1		Chr. 1 - 178726060 - 178784444 [+] on Build GRCh38	84

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 4424	MIR4424		-46.5kb	Anti-sense	Chr. 1 - 178677749 - 178677834 on NCBI Build GRCh38
Downstream	angiopoietin like 1	ANGPTL1	ANG3, ANGPT3, ARP1, AngY, UNQ162, dJ595C2.2	123.3kb	Sense	Chr. 1 - 178849535 - 178871353 on NCBI Build GRCh38

More Information

Additional Information:

This assay is in the 5'UTR region of the XM_006711410.3 transcripts.

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

guanyl-nucleotide exchange factor

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Agilent Affymetrix Illumina

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Array Name	Probe IDs	Targets	Target Type
Agilent Whole Human Genome Microarray 4x44K v2	A_24_P350546	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_24_P350546	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	6051	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	25467	-	-
SurePrint G3 Human GE Microarray G4851A	A_24_P350546	-	-
Whole Human Genome Oligo Microarray G4112A	A_24_P350546	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	7922597	-	-
Affymetrix Human Gene 1.1 ST Array	7922596	-	-
Affymetrix Human Transcriptome Array 2.0	TC0100016536.hg.1	ENST00000608517.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100016536.hg.1	ENST00000608517.1	Ensembl

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1658905	-	-
Illumina human-6 v2.0 expression beadchip	ILMN_1658905	-	-
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1658905	-	-

System Message

Genomic Map