Name: [Hs03655891_m1] [CACTIN-AS1]
Creator: Thermo Fisher Scientific
Keywords: [CACTIN-AS1] Assay, [CACTIN antisense RNA 1] Assay

Assay Details

Gene Symbol: CACTIN-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038865.1		1 - 2	163		70
GenBank mRNA	AK097999.1	-	1 - 2	164		70

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DB116596.1	-	1 - 2	164		Chr. 19 - 3607247 - 3612077 [+] on Build GRCh38	70

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	cactin, spliceosome C complex subunit	CACTIN	C19orf29, NY-REN-24, fSAPc		Anti-sense	Chr. 19 - 3610628 - 3626815 on NCBI Build GRCh38
Downstream	phosphatidylinositol-4-phosphate 5-kinase type 1 gamma	PIP5K1C	LCCS3, PIP5K-GAMMA, PIP5K1-gamma, PIP5Kgamma	18.9kb	Anti-sense	Chr. 19 - 3630181 - 3700492 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1900006647.hg.1
This assay targets the same location as HTA transcript cluster(s) TC19000074.hg.1

Set Membership:

Amplicon length less than or equal to 70

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR19001188.hg.1	NR_038865.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19001188.hg.1	TC19000074.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19001189.hg.1	NR_038865.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19001189.hg.1	TC19000074.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19001191.hg.1	ENST00000447295.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19001191.hg.1	NR_038865.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19001191.hg.1	TC19000074.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	TC1900006647.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900146520.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900146520.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900146520.hg.1	TC1900006647.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900146520.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900146520.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900146518.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900146518.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900146518.hg.1	TC1900006647.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900146518.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900146518.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900146517.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900146517.hg.1	NR_038865.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900146517.hg.1	TC1900006647.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900146517.hg.1	ENST00000592274.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900146517.hg.1	NR_038865.1	Refseq

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System Message

Genomic Map