Name: [Hs03656696_g1] [LOC400958]
Creator: Thermo Fisher Scientific
Keywords: [LOC400958] Assay, [uncharacterized LOC400958] Assay

Assay Details

Gene Symbol: LOC400958
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_036586.1		2 - 3	251		105
GenBank mRNA	BC037562.1	-	2 - 3	251		105

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BI912652.1	-	2 - 3	280		Chr. 2 - 64904305 - 64932447 [-] on Build GRCh38	105

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC101927438	LOC101927438		-38.2kb	Sense	Chr. 2 - 64846130 - 64863631 on NCBI Build GRCh38
Downstream	solute carrier family 1 member 4	SLC1A4	ASCT1, SATT, SPATCCM	83.3kb	Anti-sense	Chr. 2 - 64988445 - 65023865 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200012837.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02001919.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237601	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318413	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237653	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237603	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237638	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318369	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237629	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237617	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318505	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237533	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318382	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318446	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237490	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237552	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237500	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237485	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237591	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318453	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318418	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318388	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237549	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237643	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237492	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237491	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237652	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237526	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237586	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237602	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318516	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237538	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237578	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237564	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237645	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237521	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318435	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237486	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237524	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237598	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237573	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237611	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318420	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237589	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15250324	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15250322	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237584	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237646	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237503	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237559	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237525	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318508	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318417	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237588	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318525	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318391	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318448	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237529	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318504	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15250323	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318449	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237535	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237650	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237531	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318484	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318509	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318445	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318421	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318457	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237630	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318491	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237651	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318476	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237499	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237639	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237506	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318480	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237505	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237582	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318428	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318362	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318513	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237536	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237620	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318415	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237546	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237513	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237596	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237566	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237553	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318479	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237595	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237626	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318490	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237567	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237527	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237609	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237558	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318372	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237563	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237565	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237594	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15250327	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237599	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318355	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15250328	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237488	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237561	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318483	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237556	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15250325	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237497	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01237597	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21318478	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	1208	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	80022	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	133205	-	-
Agilent SurePrint G3 Human CGH Microarray 8x60K	37691	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	515019	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	479277	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	168769	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	248651	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	727516	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	372733	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	667429	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	382676	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	38990	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	583860	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	315046	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	945711	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3416712	-	-
Agilent Human Genome CGH Microarray 44B	A_14_P132689	-	-
Agilent Human Genome CGH Microarray 44A	A_14_P132689	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	32893	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P15683819	-	-
Agilent Human Genome CGH + SNP Microarray	A_14_P132689	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P15683876	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P15683819	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P15683876	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3416712	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3416712	-	-
Agilent Human Genome CGH Microarray 105A (G4412A)	A_14_P132689	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_14_P132689	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P15683876	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P15683819	-	-
Agilent Human Genome CGH Microarray 4x44K	A_14_P132689	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	2157	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	165340	-	-
Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015	81552	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00392254	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P15683876	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00392270	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P35708969	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00392278	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_18_P21652809	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P35708952	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P15683819	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P35708948	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P15683811	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00392248	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P00392251	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_14_P132689	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P00392254	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P15683819	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_14_P132689	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P15683876	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_18_P21652809	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT HG-U133+ PM Array Plate	1570006_PM_at	-	-
Affymetrix Human Transcriptome Array 2.0	PSR02030620.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02030620.hg.1	NR_036586.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02030620.hg.1	TC02001919.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0200012837.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200012837.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200012837.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200012837.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200012837.hg.1	NR_036586.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200012837.hg.1	NR_036586.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200012837.hg.1	NR_036586.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200012837.hg.1	NR_036586.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200012837.hg.1	NR_036586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200193566.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200193566.hg.1	NR_036586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200193566.hg.1	TC0200012837.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200193566.hg.1	NR_036586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200193566.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200193568.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200193568.hg.1	NR_036586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200193568.hg.1	TC0200012837.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200193568.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200193568.hg.1	NR_036586.1	Refseq
Affymetrix Human Clariom D Assay	TC0200012837.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200012837.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200012837.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200012837.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200012837.hg.1	NR_036586.1	Refseq
Affymetrix Human Clariom D Assay	TC0200012837.hg.1	NR_036586.1	Refseq
Affymetrix Human Clariom D Assay	TC0200012837.hg.1	NR_036586.1	Refseq
Affymetrix Human Clariom D Assay	TC0200012837.hg.1	NR_036586.1	Refseq
Affymetrix Human Clariom D Assay	TC0200012837.hg.1	NR_036586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200193567.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200193567.hg.1	NR_036586.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200193567.hg.1	TC0200012837.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200193567.hg.1	ENST00000449259.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200193567.hg.1	NR_036586.1	Refseq
Human Genome U133 Plus 2.0 Array	1570006_at	-	-
Human Genome U133 Plus 2.0 Array	1570006_PM_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570006_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570006_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570006_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570006_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570006_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570006_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570006_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570006_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570006_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570006_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1570006_at7	-	-

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A013747	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A013747	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1661416	NR_036586.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1661416	BC037562.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1661416	NR_036586.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1661416	BC037562.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1661416	NR_036586.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1661416	BC037562.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1661416	NR_036586.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1661416	BC037562.1	human_transcriptome

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