LOC90784
Genomic Map
Back To TopAssay Details
| Gene Symbol: LOC90784 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_026984.1 | 1 | 2401 | 67 | ||
| GenBank mRNA | AK001612.1 | - | 1 | 2045 | 67 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | ST3GAL5 antisense RNA 1 (head to head) | ST3GAL5-AS1 | -128.6kb | Anti-sense | Chr. 2 - 85889280 - 85892252 on NCBI Build GRCh38 | |
| Downstream | RNA polymerase I subunit A | POLR1A |
A190, AFDCIN, RPA1, RPA194, RPO1-4, RPO14 |
1.7kb | Sense | Chr. 2 - 86026328 - 86106155 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0200016701.hg.1This assay targets the same location as HTA transcript cluster(s) TC02002050.hg.1
Set Membership: |
Amplicon length less than or equal to 70
3' Most
Detect Genomic DNA
Homo sapiens
1700
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
ABI
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P21415288 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332623 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P21415294 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332620 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332633 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P21415296 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P21415289 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332617 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332612 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P21415293 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P21415300 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332629 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P21415305 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P21415316 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332622 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332638 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332630 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P21415291 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332634 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332627 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P01332639 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P21415287 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 270279 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 264588 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3271480 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4904 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4905 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 4150 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3271480 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3271480 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332682 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332660 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332664 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332666 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332661 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332670 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332669 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332679 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P21415356 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P21415360 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332684 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P21415361 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15263979 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332674 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332681 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332661 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P21415360 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332682 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332681 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332679 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332684 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P21415361 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P21415356 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332660 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332670 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15263979 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332669 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332664 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332674 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P01332666 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P00421883 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P00421882 | - | - |
| Agilent Human 2 cDNA Microarray (G4101A) | 1274773 | - | - |
| Agilent Human 2 cDNA Microarray (G4101A) | 1274773 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332666 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332624 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332681 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332674 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332613 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332676 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15263977 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332631 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332661 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332664 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15263971 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332671 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332639 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332647 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332637 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332620 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332669 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332652 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332629 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332622 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15263979 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332655 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332645 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332640 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332648 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15263966 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332678 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332656 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15263976 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332614 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332635 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15263975 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332633 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15263974 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332617 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332644 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332627 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332650 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P01332612 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 2x400K | A_16_P00421882 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT HG-U133+ PM Array Plate | 228515_PM_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR02032812.hg.1 | TC02002050.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR02032812.hg.1 | NR_026984.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0200227063.hg.1 | NR_026984.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0200227063.hg.1 | NR_026984.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0200227063.hg.1 | TC0200016701.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0200227062.hg.1 | NR_026984.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0200227062.hg.1 | NR_026984.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0200227062.hg.1 | TC0200016701.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0200227061.hg.1 | NR_026984.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0200227061.hg.1 | NR_026984.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0200227061.hg.1 | TC0200016701.hg.1 | Clariom D TC |
| Human Genome U133 Plus 2.0 Array | 228515_at | - | - |
| Human Genome U133 Plus 2.0 Array | 228515_PM_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 228515_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 228515_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 228515_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 228515_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 228515_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 228515_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 228515_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 228515_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 228515_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 228515_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 228515_at5 | - | - |
| Human Genome U95 Set | 45463_at | - | - |
| Human Genome U95 Set | 45463_PM_at | - | - |
| Human Genome U95 Set | 61086_PM_at | - | - |
| Human Genome U95 Set | 51233_PM_at | - | - |
| Human Genome U95 Set | 51233_at | - | - |
| Human Genome U95 Set | 61086_at | - | - |
| Human Genome U133 Set | 228515_PM_at | - | - |
| Human Genome U133 Set | 228515_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A013958 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A013958 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Human Genome Survey Microarray Version 2.0 | 233948 | - | - |
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