Name: [Hs03676048_s1] [LOC554206]
Creator: Thermo Fisher Scientific
Keywords: [LOC554206] Assay, [leucine carboxyl methyltransferase 1 pseudogene] Assay

Assay Details

Gene Symbol: LOC554206
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038379.1		1	51		91
GenBank mRNA	BC029609.1	-	1	48		91
GenBank mRNA	DB115487.1	-	1	51		91

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BI600002.1	-	1	53		Chr. 16 - 25031744 - 25032501 [+] on Build GRCh38	91

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	thyroid hormone receptor interactor 11 pseudogene	LOC100421171		-9.4kb	Sense	Chr. 16 - 25015978 - 25022380 on NCBI Build GRCh38
Downstream	uncharacterized LOC283887	LOC283887		34.3kb	Sense	Chr. 16 - 25066887 - 25068955 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600007268.hg.1
This assay targets the same location as HTA transcript cluster(s) TC16000266.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

1700

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492982	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968621	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968624	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968605	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968597	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968609	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968600	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968608	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492981	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492947	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968607	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968610	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492966	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968599	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968627	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492965	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968623	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968628	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492988	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968633	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968595	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968603	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968606	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968601	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968611	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968614	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968620	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492984	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492956	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492967	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492970	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968591	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968626	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968632	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492968	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968618	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968592	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968612	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P30492983	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P09968625	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	2079	-	-
Agilent SurePrint G3 Human CGH Microarray 8x60K	42717	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	142908	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	877097	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	474077	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	276	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_23_P434040	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	34218	-	-
Agilent Human Genome CGH Microarray 44B	A_14_P124057	-	-
Agilent Human Genome CGH Microarray 44A	A_14_P124057	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	2275	-	-
Agilent Human Genome CGH + SNP Microarray	A_14_P124057	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3294966	-	-
Whole Human Genome Oligo Microarray G4112A	A_23_P434040	-	-
Agilent Human Genome CGH Microarray 105A (G4412A)	A_14_P124057	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_14_P124057	-	-
Agilent Human Genome CGH Microarray 4x44K	A_14_P124057	-	-
Agilent Whole Human Genome Microarray 4x44K G4112F	A_23_P434040	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	156433	AF085481.1	genbank_mrna_human
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	156433	AK026943.1	genbank_mrna_human
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	156433	AK290378.1	genbank_mrna_human
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	156433	BC016475.1	genbank_mrna_human
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	156433	NM_004657.4	refseq_mrna_human_NM
Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015	97153	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_14_P124057	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P03129520	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_14_P124057	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	7994236	-	-
Affymetrix Human Gene 1.1 ST Array	7994235	-	-
Affymetrix HT HG-U133+ PM Array Plate	1554187_PM_at	-	-
Affymetrix HT HG-U133+ PM Array Plate	1554185_PM_at	-	-
Affymetrix Human Transcriptome Array 2.0	PSR16003989.hg.1	NR_038379.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16003989.hg.1	TC16000266.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1600007268.hg.1	ENST00000575694.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007268.hg.1	ENST00000575694.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007268.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007268.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007268.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600007268.hg.1	NR_038379.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007268.hg.1	NR_038379.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600007268.hg.1	NR_038379.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600152374.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600152374.hg.1	NR_038379.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600152374.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600152374.hg.1	NR_038379.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600152374.hg.1	TC1600007268.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1600007268.hg.1	ENST00000575694.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007268.hg.1	ENST00000575694.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007268.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007268.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007268.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600007268.hg.1	NR_038379.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007268.hg.1	NR_038379.1	Refseq
Affymetrix Human Clariom D Assay	TC1600007268.hg.1	NR_038379.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600152372.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600152372.hg.1	NR_038379.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600152372.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600152372.hg.1	NR_038379.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600152372.hg.1	TC1600007268.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1600152373.hg.1	ENST00000575694.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600152373.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600152373.hg.1	NR_038379.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600152373.hg.1	ENST00000575694.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600152373.hg.1	ENST00000619106.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600152373.hg.1	NR_038379.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600152373.hg.1	TC1600007268.hg.1	Clariom D TC
Human Genome U133 Plus 2.0 Array	1554185_at	-	-
Human Genome U133 Plus 2.0 Array	1554185_PM_at	-	-
Human Genome U133 Plus 2.0 Array	1554187_at	-	-
Human Genome U133 Plus 2.0 Array	1554187_PM_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554185_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554185_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554185_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554187_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554187_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554185_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554185_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554187_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554187_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554187_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554187_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554187_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554187_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554185_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554185_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554185_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554185_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554185_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554187_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554187_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554187_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1554185_at10	-	-
Human Genome U95 Set	92033_PM_at	-	-
Human Genome U95 Set	92033_at	-	-

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A054402	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A054402	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	694208	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1690036	BC029609.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1690036	NR_038379.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1690036	AI553759.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1690036	AI696363.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1690036	AK097891.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1754134	-	-
Illumina human-6 v2.0 expression beadchip	ILMN_1754134	-	-
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1690036	BC029609.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1690036	NR_038379.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1690036	AI553759.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1690036	AI696363.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1690036	AK097891.1	human_transcriptome

Name
Phone number
Email
Budget number
PI Name
PI Email
Building and Room number
Pickup Delivery

Availability	Made To Order
Catalog #	4426961
Price
Your Price
Online offer:


Check your price ›

System Message

Genomic Map