Assay Details

Gene Symbol: LOC399815
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027282.1		2 - 3	530		101
GenBank mRNA	AK300776.1	-	2 - 3	434		101
GenBank mRNA	BC053499.1	-	4 - 5	775		101

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA905937.1	-	2 - 3	443		Chr. 10 - 122879730 - 122884782 [+] on Build GRCh38	101

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	FAM24B-CUZD1 readthrough	FAM24B-CUZD1		-1.0kb	Anti-sense	Chr. 10 - 122832155 - 122879641 on NCBI Build GRCh38
Downstream	family with sequence similarity 24 member A	FAM24A		29.0kb	Sense	Chr. 10 - 122910595 - 122913111 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000009163.hg.1
This assay targets the same location as HTA transcript cluster(s) TC10000893.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK300776.1, BC053499.1 transcripts.

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Mammalian Gene Collection

Homo sapiens

1700

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928972	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P07538154	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928984	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928970	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P07538146	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928976	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928978	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P07538152	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P07538143	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928977	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928971	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P07538151	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P07538145	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928963	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928982	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928985	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P07538163	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928975	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928968	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P27928981	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	149582	AJ608770.1	genbank_mrna_human
Agilent SurePrint G3 Human CGH Microarray 4x180K	149582	AJ608771.1	genbank_mrna_human
Agilent SurePrint G3 Human CGH Microarray 4x180K	149582	AJ626860.1	genbank_mrna_human
Agilent SurePrint G3 Human CGH Microarray 4x180K	149582	AJ626861.1	genbank_mrna_human
Agilent SurePrint G3 Human CGH Microarray 4x180K	149582	AK128650.1	genbank_mrna_human
Agilent SurePrint G3 Human CGH Microarray 4x180K	149582	CR936716.1	genbank_mrna_human
Agilent SurePrint G3 Human CGH Microarray 4x180K	149582	NM_001018088.1	refseq_mrna_human_NM
Agilent SurePrint G3 Human CGH Microarray 4x180K	149582	NM_017684.3	refseq_mrna_human_NM
Agilent SurePrint G3 Human CGH Microarray 4x180K	149582	NM_018080.2	refseq_mrna_human_NM
Agilent SurePrint G3 Human CGH Microarray 4x180K	149582	NM_020821.1	refseq_mrna_human_NM
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	653395	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	90425	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	748081	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	838174	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	186232	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	771100	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	114055	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	189781	AK289872.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	189781	BC004913.2	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	189781	BC010450.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	189781	CR592333.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	189781	CR592335.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	189781	CR593687.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	189781	CR597848.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	189781	NM_005973.4	refseq_mrna_human_NM
Agilent SurePrint G3 Human CNV Microarray 2x400K	189781	S69270.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	189781	X97124.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	30914	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	136110	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	224764	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	151741	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3607359	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_5096	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_5095	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	32305	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	16472	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P39209359	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P19096149	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3607359	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3607359	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P07538081	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928891	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928887	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P07538089	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928885	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P07538088	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928886	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P07538082	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928892	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928888	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P07538086	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928891	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928885	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P07538089	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P07538088	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928888	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P07538081	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928887	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P07538086	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928886	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P27928892	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P07538082	-	-
Agilent Human Genome CGH Microarray 105A (G4412A)	A_16_P19096149	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	130694	-	-
Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015	103133	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P39209350	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P02361850	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P19096149	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538162	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538166	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538167	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538177	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538081	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538076	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538191	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538170	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538186	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538182	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538147	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538085	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538144	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538175	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538184	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538154	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538164	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538172	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538156	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538180	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538089	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538188	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538088	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538146	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538150	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538152	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538159	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538079	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538179	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P07538083	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P02361850	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P19096149	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P39209359	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P19096176	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Genome U219 Array	11749606_at	-	-
Affymetrix Human Genome U219 Array	11749606_PM_at	-	-
Affymetrix Human Genome U219 Array	11749607_PM_x_at	-	-
Affymetrix Human Genome U219 Array	11749607_x_at	-	-
Affymetrix Human Genome U219 Array	11755528_PM_a_at	-	-
Affymetrix Human Genome U219 Array	11755528_a_at	-	-
Affymetrix Human Transcriptome Array 2.0	PSR10010948.hg.1	NR_027282.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10010948.hg.1	TC10000893.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR10010942.hg.1	NR_027282.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10010942.hg.1	TC10000893.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR10010944.hg.1	NR_027282.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10010944.hg.1	TC10000893.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR10010945.hg.1	NR_027282.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10010945.hg.1	TC10000893.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR10010947.hg.1	ENST00000425266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10010947.hg.1	NR_027282.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10010947.hg.1	TC10000893.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR10010946.hg.1	ENST00000425266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10010946.hg.1	NR_027282.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10010946.hg.1	TC10000893.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1000162879.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162879.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162879.hg.1	TC1000009163.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000162879.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162879.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162883.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162883.hg.1	TC1000009163.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000162883.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162886.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162886.hg.1	ENST00000425266.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162886.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162886.hg.1	TC1000009163.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000162886.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162886.hg.1	ENST00000425266.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162886.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162887.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162887.hg.1	ENST00000425266.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162887.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162887.hg.1	TC1000009163.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000162887.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162887.hg.1	ENST00000425266.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162887.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162890.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162890.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162890.hg.1	TC1000009163.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000162890.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162890.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162891.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162891.hg.1	TC1000009163.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000162891.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162889.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162889.hg.1	ENST00000425266.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162889.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162889.hg.1	TC1000009163.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000162889.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162889.hg.1	ENST00000425266.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162889.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162885.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162885.hg.1	NR_027282.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000162885.hg.1	TC1000009163.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000162885.hg.1	ENST00000368895.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000162885.hg.1	NR_027282.1	Refseq
Human Genome U95 Set	56397_at	-	-
Human Genome U95 Set	56397_PM_at	-	-

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A044602	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A044602	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	210925	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1793686	BC053499.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1793686	NR_027282.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1793686	AK300776.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1793686	BC053499.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1793686	NR_027282.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1793686	AK300776.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1793686	BC053499.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1793686	NR_027282.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1793686	AK300776.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1793686	BC053499.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1793686	NR_027282.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1793686	AK300776.1	human_transcriptome

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Catalog #	4426961
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Genomic Map