Assay Details

Gene Symbol: MIR181A1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_029626.1		1	57		76

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	MIR181A1 host gene	MIR181A1HG			Sense	Chr. 1 - 198808003 - 198937429 on NCBI Build GRCh38
Downstream	long intergenic non-protein coding RNA 1222	LINC01222	TCONS_00000112	133.4kb	Sense	Chr. 1 - 198992589 - 199018964 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC0100016865.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01003672.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776125	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15159300	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776167	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776138	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776162	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776135	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776132	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776119	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15159293	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776158	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15159274	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776148	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776103	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716490	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716484	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776157	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776172	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776142	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716492	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776114	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776161	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776111	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776115	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776122	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15159287	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776109	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776152	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776136	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776156	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776159	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776117	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776164	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716474	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776145	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776150	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716499	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716506	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776140	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776120	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776143	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716527	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776128	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15159290	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776134	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776106	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776151	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776104	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776155	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776101	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776142	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716527	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776161	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776117	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776140	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776172	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776143	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776115	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776134	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776120	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776119	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776106	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776150	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776138	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15159290	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716506	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15159293	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776135	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776128	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776152	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776157	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776122	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776162	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716484	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776159	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776104	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716474	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716499	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776125	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776109	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776156	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716490	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776114	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15159300	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776148	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15159287	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15159274	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776158	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776151	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776111	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776155	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776167	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776164	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776132	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776101	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776136	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00716492	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776103	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20776145	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.1 ST Array	7923175	-	-
Affymetrix Human Transcriptome Array 2.0	TC0100016865.hg.1	ENST00000385026.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100016865.hg.1	ENST00000385026.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100016865.hg.1	NR_029626.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100016865.hg.1	NR_029626.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01056285.hg.1	TC01003672.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01056285.hg.1	ENST00000385026.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01056285.hg.1	NR_029626.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100227600.hg.1	ENST00000385026.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100227600.hg.1	NR_029626.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100227600.hg.1	ENST00000385026.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100227600.hg.1	NR_029626.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100227600.hg.1	TC0100016865.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100227601.hg.1	ENST00000385026.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100227601.hg.1	NR_029626.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100227601.hg.1	ENST00000385026.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100227601.hg.1	NR_029626.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100227601.hg.1	TC0100016865.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0100016865.hg.1	ENST00000385026.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100016865.hg.1	ENST00000385026.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100016865.hg.1	NR_029626.1	Refseq
Affymetrix Human Clariom D Assay	TC0100016865.hg.1	NR_029626.1	Refseq

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A009362	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A009362	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3309289	NR_029626.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3309289	NR_029626.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3309289	NR_029626.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3309289	NR_029626.1	human_transcriptome

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Genomic Map