Assay Details

Gene Symbol: MIR3117
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_036060.1		1	29		75

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	GD260754.1	-	1			Chr. 1 - 66628254 - 66628734 [-] on Build GRCh38	75

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	SH3 domain GRB2 like endophilin interacting protein 1	SGIP1			Sense	Chr. 1 - 66533272 - 66751139 on NCBI Build GRCh38
Downstream	Tctex1 domain containing 1	TCTEX1D1		123.9kb	Sense	Chr. 1 - 66752147 - 66779051 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC0100008633.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01000735.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01011826.hg.1	TC01000735.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01011826.hg.1	NR_036060.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008633.hg.1	ENST00000584034.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008633.hg.1	ENST00000584034.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008633.hg.1	NR_036060.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008633.hg.1	ENST00000584034.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100008633.hg.1	ENST00000584034.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100008633.hg.1	NR_036060.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100161425.hg.1	ENST00000584034.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100161425.hg.1	NR_036060.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100161425.hg.1	ENST00000584034.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100161425.hg.1	NR_036060.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100161425.hg.1	TC0100008633.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map