Assay Details

Gene Symbol: MIR3607
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_037402.1		1	32		77

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	N73799.1	-	1		Chr. 5 - 86620158 - 86620764 [-] on Build GRCh38	77
GenBankmRNA	BX374030.1	-	1		Chr. 5 - 86619888 - 86620761 [-] on Build GRCh38	77
GenBankmRNA	AI561205.1	-	1		Chr. 5 - 86620269 - 86620766 [-] on Build GRCh38	77
GenBankmRNA	BX341336.2	-			Chr. - - [-] on Build	77
GenBankmRNA	AI284581.1	-	1		Chr. 5 - 86620441 - 86620766 [-] on Build GRCh38	77
GenBankmRNA	CR599916.1	-	2	1351	Chr. 5 - 86617956 - 86620761 [+] on Build GRCh38	77
GenBankmRNA	HY303158.1	-	1		Chr. 5 - 86620273 - 86620764 [-] on Build GRCh38	77
GenBankmRNA	AI272373.1	-	1		Chr. 5 - 86620431 - 86620764 [-] on Build GRCh38	77
GenBankmRNA	AI978731.1	-	1		Chr. 5 - 86620295 - 86620766 [-] on Build GRCh38	77
GenBankmRNA	BX434668.1	-	1		Chr. 5 - 86619881 - 86620761 [-] on Build GRCh38	77

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	neuroblastoma breakpoint family member 22, pseudogene	NBPF22P		-323.0kb	Sense	Chr. 5 - 86282444 - 86297547 on NCBI Build GRCh38
Downstream	uncharacterized LOC100505878	LOC100505878		126.2kb	Sense	Chr. 5 - 86746818 - 86749772 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC0500008008.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05000427.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR05006025.hg.1	ENST00000362392.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05006025.hg.1	ENST00000509578.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05006025.hg.1	NR_037402.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05006025.hg.1	TC05000427.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0500154769.hg.1	ENST00000509578.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500154769.hg.1	NR_037402.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500154769.hg.1	TC0500008008.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500154769.hg.1	NR_037402.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500154769.hg.1	ENST00000509578.1	Ensembl

System Message

Genomic Map