Assay Details

Gene Symbol: MIR3942
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_037507.1		1	51		100

Gene Symbol: DPH6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_017022707.1	XP_016878196.1	8	2038		100

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	acidic nuclear phosphoprotein 32 family member A pseudogene 1	ANP32AP1		-134.2kb	Anti-sense	Chr. 15 - 35237326 - 35238063 on NCBI Build GRCh38
Downstream	DPH6 antisense RNA 1 (head to head)	DPH6-AS1	ATPBD4-AS1	173.8kb	Anti-sense	Chr. 15 - 35546195 - 35859001 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC1500009026.hg.1
This assay targets the same location as HTA transcript cluster(s) TC15001206.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1500009026.hg.1	ENST00000585264.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1500009026.hg.1	NR_037507.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR15010823.hg.1	NR_037507.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR15010823.hg.1	TC15001206.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC1500009026.hg.1	ENST00000585264.1	Ensembl
Affymetrix Human Clariom D Assay	TC1500009026.hg.1	NR_037507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1500165224.hg.1	ENST00000585264.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1500165224.hg.1	NR_037507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1500165224.hg.1	TC1500009026.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1500165224.hg.1	NR_037507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1500165224.hg.1	ENST00000585264.1	Ensembl

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