Name: [Hs04273881_m1] [LOC283440]
Creator: Thermo Fisher Scientific
Keywords: [LOC283440] Assay, [uncharacterized LOC283440] Assay

Assay Details

Gene Symbol: LOC283440
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033958.1		4 - 5	469		85
GenBank mRNA	BU657491.1	-	4 - 5	479		85

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	calcium voltage-gated channel subunit alpha1 C	CACNA1C	CACH2, CACN2, CACNL1A1, CCHL1A1, CaV1.2, LQT8, TS	-63.3kb	Anti-sense	Chr. 12 - 1969677 - 2697949 on NCBI Build GRCh38
Downstream	FK506 binding protein 4	FKBP4	FKBP51, FKBP52, FKBP59, HBI, Hsp56, PPIase, p52	27.4kb	Anti-sense	Chr. 12 - 2794942 - 2805423 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200009614.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12001100.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12014535.hg.1	ENST00000536497.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12014535.hg.1	NR_033958.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12014535.hg.1	TC12001100.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1200009614.hg.1	ENST00000536497.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009614.hg.1	ENST00000536497.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009614.hg.1	ENST00000536497.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009614.hg.1	ENST00000536497.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009614.hg.1	NR_033958.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200009614.hg.1	NR_033958.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200009614.hg.1	NR_033958.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200009614.hg.1	NR_033958.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171866.hg.1	ENST00000536497.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171866.hg.1	NR_033958.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200171866.hg.1	TC1200009614.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200171866.hg.1	ENST00000536497.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200171866.hg.1	NR_033958.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009614.hg.1	ENST00000536497.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009614.hg.1	ENST00000536497.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009614.hg.1	ENST00000536497.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009614.hg.1	ENST00000536497.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200009614.hg.1	NR_033958.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009614.hg.1	NR_033958.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009614.hg.1	NR_033958.1	Refseq
Affymetrix Human Clariom D Assay	TC1200009614.hg.1	NR_033958.1	Refseq

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1659959	NR_033958.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1659959	BU657491.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1659959	NR_033958.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1659959	BU657491.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1659959	NR_033958.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1659959	BU657491.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1659959	NR_033958.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1659959	BU657491.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1659959	NR_033958.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1659959	BU657491.1	human_transcriptome

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