Name: [Hs04273891_m1] [LOC401177]
Creator: Thermo Fisher Scientific
Keywords: [LOC401177] Assay, [uncharacterized LOC401177] Assay

Assay Details

Gene Symbol: LOC401177
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033975.1		2 - 3	709		115
GenBank mRNA	BC052942.1	-	2 - 3	709		115

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	brain abundant membrane attached signal protein 1	BASP1	CAP-23, CAP23, NAP-22, NAP22	-102.1kb	Anti-sense	Chr. 5 - 17216823 - 17276845 on NCBI Build GRCh38
Downstream	uncharacterized LOC101929544	LOC101929544		18.7kb	Anti-sense	Chr. 5 - 17404019 - 17441694 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500010221.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05001191.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794219	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961162	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794190	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961232	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961243	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961234	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794177	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794183	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961245	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961196	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794202	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794240	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961151	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961222	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794136	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794130	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794153	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794218	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961181	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961218	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794166	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961216	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794172	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961173	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794203	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961165	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961228	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794147	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794158	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961160	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15668752	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794168	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794122	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794205	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794123	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794238	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961178	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794139	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794163	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961205	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961233	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794125	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794245	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794192	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961253	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794140	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794214	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961238	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794118	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794247	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794129	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15668753	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794167	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794211	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961200	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961241	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961184	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961197	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961166	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961257	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961172	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961190	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961239	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961198	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961201	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961145	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961237	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961156	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961244	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961152	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961215	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794243	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794146	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961155	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961219	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961176	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961242	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961146	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794200	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794204	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794225	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961251	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15668755	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961144	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961169	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P15668751	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794160	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794141	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961217	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961140	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P23961183	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P03794157	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	178205	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	10145	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	160496	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3440240	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	50903	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P01188523	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3440240	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3440240	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P01188523	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P01188523	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500010221.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010221.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010221.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010221.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010221.hg.1	NR_033975.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010221.hg.1	NR_033975.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010221.hg.1	NR_033975.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500010221.hg.1	NR_033975.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05016988.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05016988.hg.1	NR_033975.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05016988.hg.1	TC05001191.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05016990.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05016990.hg.1	NR_033975.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05016990.hg.1	TC05001191.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05016989.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05016989.hg.1	NR_033975.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05016989.hg.1	TC05001191.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0500171522.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171522.hg.1	NR_033975.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171522.hg.1	TC0500010221.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500171522.hg.1	NR_033975.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171522.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010221.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010221.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010221.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010221.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010221.hg.1	NR_033975.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010221.hg.1	NR_033975.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010221.hg.1	NR_033975.1	Refseq
Affymetrix Human Clariom D Assay	TC0500010221.hg.1	NR_033975.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171523.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171523.hg.1	NR_033975.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171523.hg.1	TC0500010221.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500171523.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171523.hg.1	NR_033975.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171525.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171525.hg.1	NR_033975.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171525.hg.1	TC0500010221.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500171525.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171525.hg.1	NR_033975.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171524.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171524.hg.1	NR_033975.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500171524.hg.1	TC0500010221.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500171524.hg.1	ENST00000505158.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500171524.hg.1	NR_033975.1	Refseq

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A026572	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A026572	-	-

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