Name: [Hs04274460_m1] [LOC100129027]
Creator: Thermo Fisher Scientific
Keywords: [LOC100129027] Assay, [uncharacterized LOC100129027] Assay

Assay Details

Gene Symbol: LOC100129027
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038876.1		2 - 3	181		73
GenBank mRNA	AK123852.1	-	2 - 3	181		73

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA726376.1	-	2 - 3	181		Chr. 21 - 45830870 - 45836419 [-] on Build GRCh38	73
GenBankmRNA	DA725199.1	-	2 - 3	181		Chr. 21 - 45830862 - 45836419 [-] on Build GRCh38	73

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC105372840	LOC105372840		-230.4kb	Anti-sense	Chr. 21 - 45593664 - 45603056 on NCBI Build GRCh38
Downstream	poly(rC) binding protein 3	PCBP3	ALPHA-CP3	17.3kb	Anti-sense	Chr. 21 - 45849961 - 45942454 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2100008441.hg.1
This assay targets the same location as HTA transcript cluster(s) TC21000550.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK123852.1 transcripts.

Set Membership:

Amplicon length between 71 and 85

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081699	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418362	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418397	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418359	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418402	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081663	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418412	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081678	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418390	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418367	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418388	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081674	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418380	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418399	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418415	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418375	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081685	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418372	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418354	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081694	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081665	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418414	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418394	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418391	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081698	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081655	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081704	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418383	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418413	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418368	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418378	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081701	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081661	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418406	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081667	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081641	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418355	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418407	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081647	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418374	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081645	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418364	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P32081693	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418417	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418395	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11418396	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3375681	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	24242	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	25895	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3375688	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3375681	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3375681	-	-
Agilent Human Genome CGH Microarray 105A (G4412A)	A_16_P03597210	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P03597210	-	-
Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015	82980	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR21006621.hg.1	NR_038876.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR21006621.hg.1	TC21000550.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR21006622.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR21006622.hg.1	NR_038876.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR21006622.hg.1	TC21000550.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100157189.hg.1	TC2100008441.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100157189.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100157189.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100157190.hg.1	TC2100008441.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100157190.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100157190.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100157190.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2100157190.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	ENST00000380008.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	NR_038876.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008441.hg.1	NR_038876.1	Refseq

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3263423	AK123852.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3263423	NR_038876.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1913304	-	-
Illumina Sentrix Human-6 v2 Expression BeadChip	2680332	-	-
Illumina HumanRef-6 v2.0 expression beadchip	ILMN_99241	-	-
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1913304	-	-
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1913304	-	-
Illumina HumanWG-6_V2_0_R2	ILMN_1913304	-	-

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Catalog #	4426961
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