Name: [Hs04331887_m1] [LOC643441]
Creator: Thermo Fisher Scientific
Keywords: [LOC643441] Assay, [uncharacterized LOC643441] Assay

Assay Details

Gene Symbol: LOC643441
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038846.1		1 - 2	196		64
GenBank mRNA	AK123703.1	-	1 - 2	196		64

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AI301699.1	-	2 - 3		Chr. 1 - 113200532 - 113206143 [+] on Build GRCh38	64
GenBankmRNA	BX093482.1	-	1 - 2	118	Chr. 1 - 113200532 - 113206175 [-] on Build GRCh38	64
GenBankmRNA	BF593113.1	-	2 - 3		Chr. 1 - 113200438 - 113206131 [+] on Build GRCh38	64
GenBankmRNA	DA589239.1	-	1 - 2	196	Chr. 1 - 113198396 - 113206253 [-] on Build GRCh38	64
GenBankmRNA	AA937042.1	-	2 - 3		Chr. 1 - 113200534 - 113206126 [+] on Build GRCh38	64

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC102723919	LOC102723919		-69.5kb	Anti-sense	Chr. 1 - 113131186 - 113132260 on NCBI Build GRCh38
Downstream	membrane associated guanylate kinase, WW and PDZ domain containing 3	MAGI3	MAGI-3, dJ730K3.2	184.2kb	Anti-sense	Chr. 1 - 113390474 - 113685923 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100015321.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01003003.hg.1

Set Membership:

Amplicon length less than or equal to 70

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01046677.hg.1	TC01003003.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01046677.hg.1	NR_038846.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01046678.hg.1	TC01003003.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01046678.hg.1	NR_038846.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100214297.hg.1	NR_038846.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100214297.hg.1	NR_038846.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100214297.hg.1	TC0100015321.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100214298.hg.1	NR_038846.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100214298.hg.1	NR_038846.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100214298.hg.1	TC0100015321.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map