Name: [Hs04332603_m1] [SNX17]
Creator: Thermo Fisher Scientific
Keywords: [SNX17] Assay, [sorting nexin 17] Assay

Assay Details

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DC304856.1	-	2 - 3	391	Chr. 2 - 27370617 - 27373303 [+] on Build GRCh38	71
GenBankmRNA	DC420638.1	-	2 - 3	387	Chr. 2 - 27370620 - 27373309 [+] on Build GRCh38	71
GenBankmRNA	DC359169.1	-	2 - 3	392	Chr. 2 - 27370615 - 27373304 [+] on Build GRCh38	71
GenBankmRNA	CN307078.1	-	2 - 3	324	Chr. 2 - 27370683 - 27374148 [+] on Build GRCh38	71
GenBankmRNA	DC314256.1	-	2 - 3	394	Chr. 2 - 27370614 - 27372734 [+] on Build GRCh38	71
GenBankmRNA	DC388850.1	-	2 - 3	392	Chr. 2 - 27370615 - 27373301 [+] on Build GRCh38	71
GenBankmRNA	DC314369.1	-	2 - 3	389	Chr. 2 - 27370620 - 27373304 [+] on Build GRCh38	71
GenBankmRNA	CF131524.1	-	2 - 3	356	Chr. 2 - 27370651 - 27374159 [+] on Build GRCh38	71
GenBankmRNA	DC339917.1	-	2 - 3	369	Chr. 2 - 27370638 - 27372705 [+] on Build GRCh38	71
GenBankmRNA	DC348555.1	-	2 - 3	403	Chr. 2 - 27370604 - 27373288 [+] on Build GRCh38	71
GenBankmRNA	DC381227.1	-	2 - 3	373	Chr. 2 - 27370636 - 27373311 [+] on Build GRCh38	71
GenBankmRNA	DC297236.1	-	2 - 3	398	Chr. 2 - 27370612 - 27373305 [+] on Build GRCh38	71

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	eukaryotic translation initiation factor 2B subunit delta	EIF2B4	EIF-2B, EIF2B, EIF2Bdelta	-812.0	Anti-sense	Chr. 2 - 27364352 - 27370457 on NCBI Build GRCh38
Downstream	zinc finger protein 513	ZNF513	HMFT0656, RP58	4.5kb	Anti-sense	Chr. 2 - 27377231 - 27380866 on NCBI Build GRCh38

This assay targets the same location as Clariom D transcript cluster(s) TC0200007064.hg.1

This assay is in the 5'UTR region of the AK297054.1 transcripts.

Amplicon length between 71 and 85

Homo sapiens

Probe spans exons

Function(s) Process(es)

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR0200148432.hg.1	ENST00000440760.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200148432.hg.1	ENST00000484886.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200148432.hg.1	NR_049782.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200148432.hg.1	NR_049785.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200148432.hg.1	ENST00000440760.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200148432.hg.1	ENST00000484886.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200148432.hg.1	NR_049782.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200148432.hg.1	NR_049785.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200148432.hg.1	TC0200007064.hg.1	Clariom D TC