Assay Details

Gene Symbol: MIR6871
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_106931.1		1	26		51

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DB114567.1	-	1	202		Chr. 20 - 41168847 - 41169349 [+] on Build GRCh38	51

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	PLCG1 antisense RNA 1	PLCG1-AS1	TOP1-AS1	-31.0kb	Anti-sense	Chr. 20 - 41097994 - 41138000 on NCBI Build GRCh38
Downstream	zinc fingers and homeoboxes 3	ZHX3	TIX1	9.4kb	Anti-sense	Chr. 20 - 41178449 - 41317606 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC2000007389.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2000007389.hg.1	ENST00000613433.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000007389.hg.1	NR_106931.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000151157.hg.1	ENST00000613433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000151157.hg.1	NR_106931.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000151157.hg.1	TC2000007389.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000151157.hg.1	ENST00000613433.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000151157.hg.1	NR_106931.1	Refseq
Affymetrix Human Clariom D Assay	TC2000007389.hg.1	ENST00000613433.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000007389.hg.1	NR_106931.1	Refseq

System Message

Genomic Map