Name: [Hs04402677_m1] [LINC01135]
Creator: Thermo Fisher Scientific
Keywords: [LINC01135] Assay, [long intergenic non-protein coding RNA 1135] Assay

Assay Details

Gene Symbol: LINC01135
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_108106.1		1 - 2	157		124
GenBank mRNA	DA365881.1	-	1 - 2	145		124

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA135931.1	-	1 - 2	107		Chr. 1 - 58785201 - 58899488 [+] on Build GRCh38	124

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	Jun proto-oncogene, AP-1 transcription factor subunit	JUN	AP-1, AP1, c-Jun	-1.0kb	Anti-sense	Chr. 1 - 58780791 - 58784113 on NCBI Build GRCh38
Downstream	long intergenic non-protein coding RNA 1358	LINC01358		120.8kb	Sense	Chr. 1 - 59020476 - 59088247 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100008489.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_034014.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_034014.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_034014.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_034014.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_034014.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_034015.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_034015.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_034015.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_034015.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_108106.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_108106.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008489.hg.1	NR_108106.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_034014.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_034014.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_034014.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_034014.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_034014.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_034015.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_034015.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_034015.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_034015.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_108106.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_108106.1	Refseq
Affymetrix Human Clariom D Assay	TC0100008489.hg.1	NR_108106.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160313.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100160313.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100160313.hg.1	NR_034014.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160313.hg.1	NR_034015.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160313.hg.1	NR_108106.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160313.hg.1	TC0100008489.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100160313.hg.1	NR_034015.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160313.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100160313.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100160313.hg.1	NR_034014.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160313.hg.1	NR_108106.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160297.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100160297.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100160297.hg.1	NR_034014.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160297.hg.1	NR_034015.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160297.hg.1	NR_108106.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160297.hg.1	TC0100008489.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100160297.hg.1	ENST00000419531.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100160297.hg.1	ENST00000544621.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100160297.hg.1	NR_034014.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160297.hg.1	NR_034015.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100160297.hg.1	NR_108106.1	Refseq

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