Name: [Hs04402912_m1] [PAIP2]
Creator: Thermo Fisher Scientific
Keywords: [PAIP2] Assay, [poly(A) binding protein interacting protein 2] Assay

Assay Details

Gene Symbol: PAIP2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_109830.1		2 - 3	310		124

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	CD556896.1	-	2 - 3	241	Chr. 5 - 139341901 - 139369102 [+] on Build GRCh38	124
GenBankmRNA	CD517972.1	-		319	Chr. - - [-] on Build	124
GenBankmRNA	BM701858.1	-	2 - 3	277	Chr. 5 - 139341884 - 139368910 [+] on Build GRCh38	124

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	matrin 3	MATR3	ALS21, MPD2, VCPDM	-32.1kb	Sense	Chr. 5 - 139273752 - 139331677 on NCBI Build GRCh38
Downstream	solute carrier family 23 member 1	SLC23A1	SLC23A2, SVCT1, YSPL3	2.5kb	Anti-sense	Chr. 5 - 139367196 - 139384553 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500008814.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Homo sapiens

Probe spans exons

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000265192.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000394795.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000507755.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000510080.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000510409.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000511381.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	NM_001033112.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	NM_016480.4	Refseq
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	NR_109830.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000265192.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000394795.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000507755.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000510080.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000510409.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	ENST00000511381.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	NM_001033112.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	NM_016480.4	Refseq
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	NR_109830.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500160882.hg.1	TC0500008814.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map