Name: [Hs04407446_m1] [LOC388406]
Creator: Thermo Fisher Scientific
Keywords: [LOC388406] Assay, [uncharacterized LOC388406] Assay

Assay Details

Gene Symbol: LOC388406
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_126009.1		3 - 4	330		96
GenBank mRNA	AK131012.1	-	3 - 4	331		96

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI125233.1	-	1 - 2			Chr. 17 - 60565377 - 60586623 [-] on Build GRCh38	96

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	amyloid beta precursor protein binding protein 2	APPBP2	APP-BP2, HS.84084, PAT1	-51.0kb	Anti-sense	Chr. 17 - 60443149 - 60526240 on NCBI Build GRCh38
Downstream	protein phosphatase, Mg2+/Mn2+ dependent 1D	PPM1D	PP2C-DELTA, WIP1	13.6kb	Sense	Chr. 17 - 60600183 - 60666280 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700008497.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1700008497.hg.1	ENST00000592917.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700008497.hg.1	ENST00000592917.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700008497.hg.1	ENST00000592917.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700008497.hg.1	ENST00000592917.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700008497.hg.1	NR_126009.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700008497.hg.1	NR_126009.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700008497.hg.1	NR_126009.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700008497.hg.1	NR_126009.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700163320.hg.1	ENST00000592917.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700163320.hg.1	NR_126009.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700163320.hg.1	TC1700008497.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700163320.hg.1	NR_126009.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700163320.hg.1	ENST00000592917.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700008497.hg.1	ENST00000592917.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700008497.hg.1	ENST00000592917.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700008497.hg.1	ENST00000592917.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700008497.hg.1	ENST00000592917.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700008497.hg.1	NR_126009.1	Refseq
Affymetrix Human Clariom D Assay	TC1700008497.hg.1	NR_126009.1	Refseq
Affymetrix Human Clariom D Assay	TC1700008497.hg.1	NR_126009.1	Refseq
Affymetrix Human Clariom D Assay	TC1700008497.hg.1	NR_126009.1	Refseq

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Catalog #	4426961
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System Message

Genomic Map