Name: [Hs04408052_m1] [GDNF-AS1]
Creator: Thermo Fisher Scientific
Keywords: [GDNF-AS1] Assay, [GDNF antisense RNA 1 (head to head)] Assay

Assay Details

Gene Symbol: GDNF-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_103441.1		2 - 3	248		70
	NR_103442.1		1 - 2	2557		70
	XM_017008916.1	XP_016864405.1	3 - 4	1229		70
	XM_017008917.1	XP_016864406.1	2 - 3	1537		70
	XM_017008918.1	XP_016864407.1	3 - 4	1526		70
GenBank mRNA	JF824130.1	-	2 - 3	248		70
GenBank mRNA	JF824131.1	-	1 - 2	2558		70

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AW299398.1	-	2 - 3		Chr. 5 - 37872351 - 37874894 [-] on Build GRCh38	70
GenBankmRNA	HY152702.1	-	2 - 3	196	Chr. 5 - 37839957 - 37874815 [+] on Build GRCh38	70
GenBankmRNA	AI206030.1	-	2 - 3		Chr. 5 - 37872387 - 37874890 [-] on Build GRCh38	70
GenBankmRNA	AV729152.2	-	2 - 3	157	Chr. 5 - 37840529 - 37874829 [+] on Build GRCh38	70

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	glial cell derived neurotrophic factor	GDNF	ATF1, ATF2, HFB1-GDNF, HSCR3	-32.7kb	Anti-sense	Chr. 5 - 37812677 - 37840044 on NCBI Build GRCh38
Downstream	uncharacterized LOC105374729	LOC105374729		74.0kb	Sense	Chr. 5 - 37948491 - 37951055 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500007185.hg.1

Additional Information:

This assay is in the 5'UTR region of the XM_017008916.1,XM_017008917.1,XM_017008918.1 transcripts.

Set Membership:

Amplicon length less than or equal to 70

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NM_001278094.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NM_001278094.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NM_001278094.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NM_001278094.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NR_103441.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NR_103441.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NR_103441.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NR_103441.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NR_103441.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NR_103442.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NR_103442.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NR_103442.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NR_103442.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007185.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148600.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148600.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148600.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148600.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148600.hg.1	TC0500007185.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500148599.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148599.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148599.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148599.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148599.hg.1	TC0500007185.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	NM_001278094.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	NM_001278094.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148604.hg.1	TC0500007185.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500148596.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148596.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148596.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500148596.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148596.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148596.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500148596.hg.1	TC0500007185.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500148597.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148597.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148597.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500148597.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148597.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148597.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500148597.hg.1	TC0500007185.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500148602.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148602.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148602.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148602.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500148602.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148602.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148602.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148602.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148602.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500148602.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148602.hg.1	TC0500007185.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	NM_001278094.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	NM_001278094.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500148607.hg.1	TC0500007185.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000503382.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000510986.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	ENST00000514532.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NM_001278094.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NM_001278094.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NM_001278094.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NM_001278094.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NR_103441.2	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NR_103442.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007185.hg.1	NR_103442.1	Refseq

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Catalog #	4426961
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Genomic Map