Name: [Hs04409504_s1] [SYP-AS1]
Creator: Thermo Fisher Scientific
Keywords: [SYP-AS1] Assay, [SYP antisense RNA 1] Assay

Assay Details

Gene Symbol: SYP-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046649.1		2	625		79
GenBank mRNA	AI018666.1	-	1			79

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	synaptophysin	SYP	MRX96, MRXSYP	-2.0kb	Anti-sense	Chr. X - 49187812 - 49200202 on NCBI Build GRCh38
Downstream	calcium voltage-gated channel subunit alpha1 F	CACNA1F	AIED, COD3, COD4, CORDX, CORDX3, CSNB2, CSNB2A, CSNBX2, Cav1.4, Cav1.4alpha1, JM8, JMC8, OA2	2.6kb	Anti-sense	Chr. X - 49205063 - 49233404 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00007223.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0X00007223.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007223.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00007223.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007223.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149553.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149553.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149553.hg.1	TC0X00007223.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00149554.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00149554.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149554.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00149554.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149554.hg.1	TC0X00007223.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00149555.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00149555.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149555.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00149555.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149555.hg.1	TC0X00007223.hg.1	Clariom D TC

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Catalog #	4426961
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System Message

Genomic Map