Apex1
Genomic Map
Back To TopAssay Details
| Gene Symbol: Apex1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_009687.2 | NP_033817.1 | 2 - 3 | 195 | 115 | |
| GenBank mRNA | AK013296.1 | - | 2 - 3 | 163 | 115 | |
| BC052401.1 | - | 2 - 3 | 166 | 5715485 | 115 | |
| D90374.1 | - | 1 - 2 | 123 | 115 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC1400000573.mm.1Additional Information:
This assay is in the 5'UTR region of the AK013296.1, BC052401.1, D90374.1, NM_009687.2 transcripts.
Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
3' Most
Mammalian Gene Collection
Detect Genomic DNA
Mus musculus
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
DNA repair
base-excision repair
DNA recombination
transcription, DNA-templated
regulation of transcription, DNA-templated
cellular response to DNA damage stimulus
aging
negative regulation of smooth muscle cell migration
regulation of mRNA stability
cell redox homeostasis
positive regulation of DNA repair
cellular response to hydrogen peroxide
DNA demethylation
nucleic acid phosphodiester bond hydrolysis
RNA phosphodiester bond hydrolysis, endonucleolytic
positive regulation of G1/S transition of mitotic cell cycle
regulation of nucleic acid-templated transcription
DNA binding
damaged DNA binding
transcription coactivator activity
RNA binding
DNA-(apurinic or apyrimidinic site) endonuclease activity
nuclease activity
endonuclease activity
endoribonuclease activity
exonuclease activity
double-stranded DNA 3'-5' exodeoxyribonuclease activity
3'-5' exonuclease activity
oxidoreductase activity
hydrolase activity
lyase activity
site-specific endodeoxyribonuclease activity, specific for altered base
chromatin DNA binding
phosphoric ester hydrolase activity
T/G mismatch-specific endonuclease activity
retroviral 3' processing activity
protein-containing complex binding
metal ion binding
NF-kappaB binding
DNA repair
base-excision repair
DNA recombination
transcription, DNA-templated
regulation of transcription, DNA-templated
cellular response to DNA damage stimulus
aging
negative regulation of smooth muscle cell migration
regulation of mRNA stability
cell redox homeostasis
positive regulation of DNA repair
cellular response to hydrogen peroxide
DNA demethylation
nucleic acid phosphodiester bond hydrolysis
RNA phosphodiester bond hydrolysis, endonucleolytic
positive regulation of G1/S transition of mitotic cell cycle
regulation of nucleic acid-templated transcription
DNA binding
damaged DNA binding
transcription coactivator activity
RNA binding
DNA-(apurinic or apyrimidinic site) endonuclease activity
nuclease activity
endonuclease activity
endoribonuclease activity
exonuclease activity
double-stranded DNA 3'-5' exodeoxyribonuclease activity
3'-5' exonuclease activity
oxidoreductase activity
hydrolase activity
lyase activity
site-specific endodeoxyribonuclease activity, specific for altered base
chromatin DNA binding
phosphoric ester hydrolase activity
T/G mismatch-specific endonuclease activity
retroviral 3' processing activity
protein-containing complex binding
metal ion binding
NF-kappaB binding
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P29599145 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P29599143 | - | - |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 287175 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599150 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599156 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599151 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599146 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599157 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599154 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P29599144 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P08109676 | - | - |
| Whole Mouse Genome G4122A | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | AK144251.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | NM_001033271.4 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | NM_009687.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | AK013296.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P473576 | BC052401.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P135169 | - | - |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P132234 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P11399114 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P11399108 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P11399085 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P11399088 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P29599145 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P29599143 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599151 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599184 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599204 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599205 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599216 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599215 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599144 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599154 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599175 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599173 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599208 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599197 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599191 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599156 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599198 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599178 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599199 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599143 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599195 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599180 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599187 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599211 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599188 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599172 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599150 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599213 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599157 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599203 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599201 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599148 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599190 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599185 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599182 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P29599177 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P11399103 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599148 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599150 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599154 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599157 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599146 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P29599156 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P11399094 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P11399092 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P11399088 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10419543 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10414526 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10414524 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10414525 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10414523 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1456079_PM_x_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1437715_PM_x_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1416135_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10419542 | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10414522 | - | - |
| Mouse Genome 430 2.0 Array | 1456079_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1416135_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1437715_PM_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1456079_PM_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1416135_at | - | - |
| Mouse Genome 430 2.0 Array | 1437715_x_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 11792_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 11792_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR1400004484.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004484.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004484.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004482.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004482.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004482.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004486.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004486.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004486.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004489.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004489.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004489.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004485.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004485.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004485.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004487.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004487.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004487.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004488.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004488.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004488.mm.1 | NM_009687.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004483.mm.1 | TC1400000573.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1400004483.mm.1 | NM_009687.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1400004483.mm.1 | NM_009687.2 | Refseq |
| Mouse Expression Set 430 | 1456079_PM_x_at | - | - |
| Mouse Expression Set 430 | 1437715_x_at | - | - |
| Mouse Expression Set 430 | 1456079_x_at | - | - |
| Mouse Expression Set 430 | 1416135_PM_at | - | - |
| Mouse Expression Set 430 | 1416135_at | - | - |
| Mouse Expression Set 430 | 1437715_PM_x_at | - | - |
| Murine Genome U74v2 Set | 93559_at | - | - |
| Murine Genome U74v2 Set | 93559_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1437715_PM_x_at | - | - |
| Mouse Genome 430A 2.0 Array | 1437715_x_at | - | - |
| Mouse Genome 430A 2.0 Array | 1416135_at | - | - |
| Mouse Genome 430A 2.0 Array | 1456079_PM_x_at | - | - |
| Mouse Genome 430A 2.0 Array | 1456079_x_at | - | - |
| Mouse Genome 430A 2.0 Array | 1416135_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1456079_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1456079_PM_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1416135_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1437715_PM_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1437715_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1416135_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 3190519 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 3190519 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0003190519 | - | - |
| mouse-6 v1.1 (Illumina) | scl46370.4_89-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 3190519 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl46370.4_89-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 3190519 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2776952 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2918114 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2776952 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2918114 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (3) | scl46370.4_89-S | - | - |
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