Name: [Mm01208563_g1] [Toporsos]
Creator: Thermo Fisher Scientific
Keywords: [Toporsos] Assay, [topoisomerase I binding, arginine/serine-rich, opposite strand] Assay

Assay Details

Gene Symbol: Toporsos
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045265.1		1 - 2	144		59
GenBank mRNA	AA614943.1	-	1 - 2	143		59
	AK008077.1	-		142		59
	AK019894.1	-	1 - 2	144		59

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AA290355.1	-	1 - 2	141	Chr. 4 - 40269590 - 40270194 [+] on Build GRCm38	59
GenBankmRNA	W91647.1	-	1 - 2	125	Chr. 4 - 40269598 - 40270221 [+] on Build GRCm38	59
GenBankmRNA	BM508752.1	-	1 - 2	112	Chr. 4 - 40269611 - 40270224 [+] on Build GRCm38	59
GenBankmRNA	BY156097.1	-	1 - 2	143	Chr. 4 - 40269579 - 40270224 [+] on Build GRCm38	59
GenBankmRNA	AA190030.1	-	1 - 2	126	Chr. 4 - 40269597 - 40270228 [+] on Build GRCm38	59
GenBankmRNA	BY716970.1	-	1 - 2	144	Chr. 4 - 40269579 - 40270224 [+] on Build GRCm38	59
GenBankmRNA	BB022034.1	-	1 - 2	115	Chr. 4 - 40269608 - 40270221 [+] on Build GRCm38	59
GenBankmRNA	CR516257.1	-	1 - 2		Chr. 4 - 40269591 - 40270224 [-] on Build GRCm38	59
GenBankmRNA	BM508444.1	-	1 - 2		Chr. 4 - 40269641 - 40270221 [-] on Build GRCm38	59
GenBankmRNA	W91651.1	-	1 - 2	125	Chr. 4 - 40269598 - 40270221 [+] on Build GRCm38	59
GenBankmRNA	CA461880.1	-		181	Chr. - - [-] on Build	59
GenBankmRNA	AV460479.1	-	1 - 2	131	Chr. 4 - 40269591 - 40270224 [+] on Build GRCm38	59
GenBankmRNA	DT907618.1	-	1 - 2	141	Chr. 4 - 40269590 - 40270194 [+] on Build GRCm38	59
GenBankmRNA	W91372.1	-	1 - 2	137	Chr. 4 - 40269586 - 40270222 [+] on Build GRCm38	59
GenBankmRNA	AA510458.1	-	1 - 2	104	Chr. 4 - 40269619 - 40270217 [+] on Build GRCm38	59
GenBankmRNA	AA185915.1	-	1 - 2	119	Chr. 4 - 40269601 - 40270217 [+] on Build GRCm38	59
GenBankmRNA	CB318174.1	-		142	Chr. - - [-] on Build	59
GenBankmRNA	BU562161.1	-		157	Chr. - - [-] on Build	59
GenBankmRNA	W53999.1	-		126	Chr. - - [-] on Build	59

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	Ddx58	6430573D20Rik, C330021E21, RIG-I, RLR-1	-29.8kb	Anti-sense	Chr. 4 - 40203777 - 40239825 on NCBI Build GRCm38
Downstream	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6	Ndufb6	Gm137	442.0	Anti-sense	Chr. 4 - 40270663 - 40279368 on NCBI Build GRCm38

More Information

Additional Information:

This assay is in the 5'UTR region of the AK008077.1 transcripts.

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Mus musculus

Probe spans exons

MicroArray Probes:

Affymetrix

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Catalog #	4426961
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Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0400002099.mm.1	NR_045265.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400002099.mm.1	NR_045265.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400002099.mm.1	TC0400000344.mm.1	MTA TC

System Message

Genomic Map