Xist
Genomic Map
Back To TopAssay Details
| Gene Symbol: Xist | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_001463.3 | 6 - 7 | 10257 | 150 | ||
| NR_001570.2 | 6 - 7 | 10257 | 150 | |||
| GenBank mRNA | L04961.1 | - | 6 - 7 | 10221 | 150 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | testis specific X-linked gene | Tsx | AV207184 | -38.9kb | Anti-sense | Chr. X - 103409101 - 103424588 on NCBI Build GRCm38 |
| Downstream |
Jpx transcript, Xist activator (non-protein coding) |
Jpx |
2010000I03Rik, 2510040I06Rik, Enox |
24.6kb | Anti-sense | Chr. X - 103493576 - 103506425 on NCBI Build GRCm38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0X00002775.mm.1Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Mus musculus
Probe spans exons
|
Gene Ontology Categories:
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P147879 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P177061 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | L04961.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | L04961.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P145453 | AK051106.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P145453 | L04961.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P145453 | NR_001463.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P145453 | AK011511.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P362360 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P362360 | AK011511.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P145453 | AK051106.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P145453 | L04961.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P145453 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P145453 | AK011511.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P129520 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573121 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573140 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573116 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573110 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P15045280 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573138 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573126 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14535457 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573054 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573103 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573136 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573129 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573067 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573131 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573049 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573074 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573052 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573107 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573087 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573084 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573077 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573106 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573009 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573134 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573057 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14880737 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573056 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573105 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14535460 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573085 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573109 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14535451 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573128 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573055 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573045 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573081 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573071 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573073 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14535450 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14560260 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573007 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573124 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573113 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573079 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573133 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573047 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573070 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573088 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10606179 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1427262_PM_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1436936_PM_s_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1427263_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10606178 | - | - |
| Mouse Genome 430 2.0 Array | 1436936_s_at | - | - |
| Mouse Genome 430 2.0 Array | 1427263_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1436936_PM_s_at | - | - |
| Mouse Genome 430 2.0 Array | 1427262_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1427263_at | - | - |
| Mouse Genome 430 2.0 Array | 1427262_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 213742_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 213742_at | - | - |
| Affymetrix Murine Genome 6500A Array | Msa12930_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0X00017508.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017508.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017508.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017508.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017508.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017504.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017504.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017504.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017504.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017504.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017502.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017502.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017502.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017502.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017502.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017503.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017503.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017503.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017503.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017503.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017505.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017505.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017505.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017505.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017505.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017507.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017507.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017507.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017507.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017507.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017509.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017509.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017509.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017509.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017509.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017501.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017501.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017501.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017506.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017506.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017506.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017506.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017506.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1436936_s_at | - | - |
| Mouse Expression Set 430 | 1427262_at | - | - |
| Mouse Expression Set 430 | 1427262_PM_at | - | - |
| Mouse Expression Set 430 | 1427263_at | - | - |
| Mouse Expression Set 430 | 1427263_PM_at | - | - |
| Mouse Expression Set 430 | 1436936_PM_s_at | - | - |
| Murine Genome U74v2 Set | 99126_at | - | - |
| Murine Genome U74v2 Set | 99126_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1427262_at | - | - |
| Mouse Genome 430A 2.0 Array | 1427262_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1436936_s_at | - | - |
| Mouse Genome 430A 2.0 Array | 1436936_PM_s_at | - | - |
| Mouse Genome 430A 2.0 Array | 1427263_at | - | - |
| Mouse Genome 430A 2.0 Array | 1427263_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1427263_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1436936_PM_s_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1436936_s_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1427263_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1427262_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1427262_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina mouse-6 v1.0 expression beadchip | 102630541 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 106520068 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_1242589 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2475156 | - | - |
| mouse-6 v1.1 (Illumina) | scl00213742.1_141-S | - | - |
| mouse-6 v1.1 (Illumina) | scl0213742.1_91-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 106520068 | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 102630541 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 102630541 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 106520068 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_3022688 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_3123341 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_3123341 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_1224091 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_3022688 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2475156 | - | - |
Back To Top