Name: [Mm03682018_m1] [C87499]
Creator: Thermo Fisher Scientific
Keywords: [C87499] Assay, [expressed sequence C87499] Assay

Assay Details

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BY725335.1	-	1 - 2	80	Chr. 4 - 88628169 - 88634185 [-] on Build GRCm38	90
GenBankmRNA	CJ082967.1	-	1 - 2	78	Chr. 4 - 88629059 - 88634186 [-] on Build GRCm38	90
GenBankmRNA	CJ073550.1	-	1 - 2	78	Chr. 4 - 88629022 - 88634186 [-] on Build GRCm38	90

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	interferon alpha 12	Ifna12		-25.4kb	Sense	Chr. 4 - 88602580 - 88603376 on NCBI Build GRCm38
Downstream	interferon alpha 13	Ifna13		9.5kb	Sense	Chr. 4 - 88643641 - 88644459 on NCBI Build GRCm38

This assay targets the same location as MTA transcript cluster(s) TC0400003008.mm.1

This assay is in the 5'UTR region of the AK163216.1 transcripts.

Amplicon length between 86 and 100

Mus musculus

Probe spans exons

Function(s) Process(es)

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0400024314.mm.1	TC0400003008.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400024314.mm.1	NM_198663.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400024314.mm.1	NM_198663.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0400024314.mm.1	NR_027385.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400024314.mm.1	NR_027385.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400024316.mm.1	TC0400003008.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400024316.mm.1	NM_198663.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400024316.mm.1	NM_198663.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0400024316.mm.1	NR_027385.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400024316.mm.1	NR_027385.1	Refseq