Name: [Mm03934214_s1] [C530005A16Rik]
Creator: Thermo Fisher Scientific
Keywords: [C530005A16Rik] Assay, [RIKEN cDNA C530005A16 gene] Assay

Assay Details

Gene Symbol: C530005A16Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_029450.1		1	44		61
GenBank mRNA	AK035052.1	-	1	49		61
	AK039789.1	-	1	47		61
	AK086654.1	-	1	45		61

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BB663430.1	-	1	42	Chr. 4 - 116596962 - 116597628 [-] on Build GRCm38	61
GenBankmRNA	BB634126.1	-	1	42	Chr. 4 - 116597000 - 116597628 [-] on Build GRCm38	61
GenBankmRNA	BB642790.1	-	1	42	Chr. 4 - 116597004 - 116597628 [-] on Build GRCm38	61
GenBankmRNA	BY271235.1	-	1		Chr. 4 - 116597300 - 116597695 [+] on Build GRCm38	61
GenBankmRNA	BY037189.1	-	1	35	Chr. 4 - 116592794 - 116597620 [-] on Build GRCm38	61
GenBankmRNA	BB627295.1	-	1	42	Chr. 4 - 116597003 - 116597628 [-] on Build GRCm38	61
GenBankmRNA	BY289133.1	-	1	44	Chr. 4 - 116597208 - 116597629 [-] on Build GRCm38	61

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	coiled-coil domain containing 17	Ccdc17			Anti-sense	Chr. 4 - 116596730 - 116600266 on NCBI Build GRCm38
Downstream	nuclear autoantigenic sperm protein (histone-binding)	Nasp	5033430J04Rik, AI131596, AI317140, D4Ertd767e, Epcs32, Nasp-T	3.4kb	Sense	Chr. 4 - 116601052 - 116627951 on NCBI Build GRCm38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Amplicon length less than or equal to 70

Detect Genomic DNA

Mus musculus

1700

Both primers and probe map within a single exon

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0400026703.mm.1	TC0400003342.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400026703.mm.1	NR_029450.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400026703.mm.1	NR_029450.1	Refseq

System Message

Genomic Map