Name: [Mm03935470_m1] [A230001M10Rik]
Creator: Thermo Fisher Scientific
Keywords: [A230001M10Rik] Assay, [RIKEN cDNA A230001M10 gene] Assay

Assay Details

Gene Symbol: A230001M10Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_040391.1		1 - 2	475		86
GenBank mRNA	AK038444.1	-	1 - 2	359		86

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BB632192.1	-	1 - 2	359		Chr. 3 - 102262522 - 102278973 [+] on Build GRCm38	86

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	vang-like 1 (van gogh, Drosophila)	Vangl1	Kitenin, Lpp2, Stb2, Stbm	-57.5kb	Anti-sense	Chr. 3 - 102155899 - 102205011 on NCBI Build GRCm38
Downstream	nerve growth factor	Ngf	Ngfb	201.6kb	Sense	Chr. 3 - 102469919 - 102521013 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300001028.mm.1

Set Membership:

Amplicon length between 86 and 100

Mus musculus

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300008250.mm.1	TC0300001028.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300008250.mm.1	NR_040391.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300008250.mm.1	NR_040391.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300008251.mm.1	TC0300001028.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300008251.mm.1	NR_040391.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300008251.mm.1	NR_040391.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300008253.mm.1	TC0300001028.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300008253.mm.1	NR_040391.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300008253.mm.1	NR_040391.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300008249.mm.1	TC0300001028.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300008249.mm.1	NR_040391.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300008249.mm.1	NR_040391.1	Refseq

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