Name: [Mm03940828_s1] [Clcn5]
Creator: Thermo Fisher Scientific
Keywords: [Clcn5] Assay, [chloride channel 5] Assay

Assay Details

Gene Symbol: Clcn5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	AK017285.1	-	1	849		69

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BE457089.1	-	1		Chr. X - 7153811 - 7154384 [+] on Build GRCm38	69
GenBankmRNA	AW044873.1	-	1		Chr. X - 7153810 - 7154379 [+] on Build GRCm38	69
GenBankmRNA	AI316524.1	-	1		Chr. X - 7154222 - 7171224 [+] on Build GRCm38	69
GenBankmRNA	BI143525.1	-	1	37	Chr. X - 7154193 - 7154329 [-] on Build GRCm38	69
GenBankmRNA	BE946423.1	-	1		Chr. X - 7154190 - 7154623 [+] on Build GRCm38	69
GenBankmRNA	BF471166.1	-	1	456	Chr. X - 7154190 - 7154748 [-] on Build GRCm38	69
GenBankmRNA	AV495336.1	-	1	112	Chr. X - 7154095 - 7154403 [-] on Build GRCm38	69
GenBankmRNA	CB844684.1	-	1	541	Chr. X - 7154138 - 7154821 [-] on Build GRCm38	69
GenBankmRNA	CJ191701.1	-	1	355	Chr. X - 7154206 - 7154647 [-] on Build GRCm38	69
GenBankmRNA	AV008425.2	-	1	471	Chr. X - 7154213 - 7154763 [-] on Build GRCm38	69
GenBankmRNA	CK790760.1	-	1	606	Chr. X - 7154118 - 7154854 [-] on Build GRCm38	69
GenBankmRNA	BM933241.1	-	1		Chr. X - 7154234 - 7154883 [+] on Build GRCm38	69
GenBankmRNA	BF227348.1	-	1		Chr. X - 7154206 - 7154696 [+] on Build GRCm38	69
GenBankmRNA	AI314901.1	-	1		Chr. X - 7154235 - 7178441 [+] on Build GRCm38	69
GenBankmRNA	BB308851.1	-	1	197	Chr. X - 7154211 - 7154471 [-] on Build GRCm38	69
GenBankmRNA	CD351345.1	-	2	348	Chr. X - 7153943 - 7154679 [-] on Build GRCm38	69
GenBankmRNA	BQ550986.1	-	1	446	Chr. X - 7154142 - 7154738 [-] on Build GRCm38	69
GenBankmRNA	CF550861.1	-	1		Chr. X - 7154232 - 7155087 [+] on Build GRCm38	69
GenBankmRNA	AA064186.1	-	1	227	Chr. X - 7153993 - 7154519 [-] on Build GRCm38	69
GenBankmRNA	BI135288.1	-	1		Chr. X - 7154190 - 7154475 [+] on Build GRCm38	69
GenBankmRNA	BX631374.1	-	1		Chr. X - 7154201 - 7154486 [+] on Build GRCm38	69

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	A kinase (PRKA) anchor protein 4	Akap4	AKAP-4, AKAP82, Fsc1, PRKA4, mAKAP82, p82	-75.2kb	Anti-sense	Chr. X - 7067515 - 7078609 on NCBI Build GRCm38
Downstream	microRNA 500	Mir500	Mirn500, mir-500, mmu-mir-500	82.5kb	Sense	Chr. X - 7237683 - 7237774 on NCBI Build GRCm38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Amplicon length less than or equal to 70

Detect Genomic DNA

Mus musculus

1700

Both primers and probe map within a single exon

MicroArray Probes:

ABI

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Availability	Made To Order
Catalog #	4426961
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System Message

Genomic Map