Name: [Mm03945709_s1] [D430019H16Rik]
Creator: Thermo Fisher Scientific
Keywords: [D430019H16Rik] Assay, [RIKEN cDNA D430019H16 gene] Assay

Assay Details

Gene Symbol: D430019H16Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001252508.1	NP_001239437.1	2	3257		84
GenBank mRNA	AK052429.1	-	2	3275		84
	AK081558.1	-	1	349		84
	BC058677.1	-	1	2592		84

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	CA320766.1	-	1	251	Chr. 12 - 105490315 - 105491030 [+] on Build GRCm38	84
GenBankmRNA	BY728444.1	-	1	341	Chr. 12 - 105490226 - 105490900 [+] on Build GRCm38	84
GenBankmRNA	BU709061.1	-	1	180	Chr. 12 - 105490387 - 105491143 [+] on Build GRCm38	84
GenBankmRNA	BU612313.1	-	1	354	Chr. 12 - 105490213 - 105490949 [+] on Build GRCm38	84
GenBankmRNA	BM947280.1	-	1	332	Chr. 12 - 105490235 - 105491021 [+] on Build GRCm38	84
GenBankmRNA	CV783929.1	-	1	574	Chr. 12 - 105489996 - 105490648 [+] on Build GRCm38	84

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	predicted gene 2721	Gm2721		-86.5kb	Anti-sense	Chr. 12 - 105394856 - 105403760 on NCBI Build GRCm38
Downstream	expressed sequence AU015791	AU015791		20.3kb	Sense	Chr. 12 - 105513433 - 105515249 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200001064.mm.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Mus musculus

1700

Both primers and probe map within a single exon

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1200007584.mm.1	TC1200001064.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200007584.mm.1	NM_001252508.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007584.mm.1	NM_001252508.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007585.mm.1	TC1200001064.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200007585.mm.1	NM_001252508.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007585.mm.1	NM_001252508.1	Refseq

System Message

Genomic Map