Name: [Mm03953283_s1] [C630043F03Rik]
Creator: Thermo Fisher Scientific
Keywords: [C630043F03Rik] Assay, [RIKEN cDNA C630043F03 gene] Assay

Assay Details

Gene Symbol: C630043F03Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027923.1		1	525		103
GenBank mRNA	AK012513.1	-	1	449		103
	AK039121.1	-	1	457		103
	AK041409.1	-	1	527		103
	AK042990.1	-		425		103
	AK043880.1	-	1	517		103
	AK053841.1	-	1	489		103
	AK083285.1	-	1	446		103
	AK083963.1	-	1	461		103

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BB641636.1	-	1	516	Chr. 4 - 72201254 - 72201927 [+] on Build GRCm38	103
GenBankmRNA	BB652975.1	-	1	446	Chr. 4 - 72201324 - 72202011 [+] on Build GRCm38	103
GenBankmRNA	AW211099.1	-	1	478	Chr. 4 - 72201292 - 72201845 [+] on Build GRCm38	103
GenBankmRNA	BB665543.1	-	1	486	Chr. 4 - 72201283 - 72201938 [+] on Build GRCm38	103
GenBankmRNA	BB640250.1	-	1	423	Chr. 4 - 72201348 - 72202051 [+] on Build GRCm38	103
GenBankmRNA	DV055542.1	-		449	Chr. - - [-] on Build	103
GenBankmRNA	CB201524.1	-	1	413	Chr. 4 - 72201356 - 72202098 [+] on Build GRCm38	103
GenBankmRNA	DV066411.1	-	1	515	Chr. 4 - 72201286 - 72202145 [+] on Build GRCm38	104
GenBankmRNA	DV067447.1	-	1	482	Chr. 4 - 72201318 - 72202281 [+] on Build GRCm38	103
GenBankmRNA	BQ565185.1	-	1	128	Chr. 4 - 72201642 - 72202129 [+] on Build GRCm38	103
GenBankmRNA	BB632120.1	-	1	457	Chr. 4 - 72201313 - 72201957 [+] on Build GRCm38	103
GenBankmRNA	AW989298.1	-	1	338	Chr. 4 - 72201431 - 72201936 [+] on Build GRCm38	103
GenBankmRNA	BQ571368.1	-	1	361	Chr. 4 - 72201408 - 72202170 [+] on Build GRCm38	103
GenBankmRNA	BQ551302.1	-	1	73	Chr. 4 - 72201696 - 72202307 [+] on Build GRCm38	103
GenBankmRNA	BX512189.1	-	1	499	Chr. 4 - 72201291 - 72201853 [+] on Build GRCm38	103
GenBankmRNA	BB656977.1	-	1	461	Chr. 4 - 72201309 - 72201935 [+] on Build GRCm38	103
GenBankmRNA	BY682206.1	-	1		Chr. 4 - 72201708 - 72202095 [+] on Build GRCm38	103
GenBankmRNA	BY711639.1	-	1	446	Chr. 4 - 72201324 - 72202096 [+] on Build GRCm38	103

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	transducin-like enhancer of split 1, homolog of Drosophila E(spl)	Tle1	C230057C06Rik, Estm14, Grg-1, Grg1, Tle4l	-431.0	Anti-sense	Chr. 4 - 72109945 - 72200893 on NCBI Build GRCm38
Downstream	aldolase 1 A, retrogene 1	Aldoart1	4921524E03Rik, Aldo1-ps, Aldo1-ps2, Aldoa-ps2	648.5kb	Anti-sense	Chr. 4 - 72850583 - 72852634 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400000764.mm.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Mus musculus

1700

Both primers and probe map within a single exon

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	824957	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	636286	AK004078.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	636286	AK031866.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	636286	AK080642.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	636286	AK145197.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	636286	BC038310.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	636286	BC055847.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	636286	NM_026812.2	refseq_mrna_mouse_NM
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	374384	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	73203	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	536973	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	817276	BC019414.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	817276	NM_134032.2	refseq_mrna_mouse_NM
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	601950	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	88694	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	658764	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	31695	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P161560	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_53_P161560	-	-
Whole Mouse Genome G4122A	A_51_P368743	AK053841.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P368743	AK043880.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P368743	AK039121.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P368743	AK041409.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P368743	NR_027923.1	mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P104107	-	-
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_53_P161560	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03309787	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P23012987	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P23012992	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03739209	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P03877743	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P23012995	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P23012999	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1433762_PM_at	-	-
Affymetrix HT MG-430 PM Array Plate	1455542_PM_at	-	-
Mouse Genome 430 2.0 Array	1455542_at	-	-
Mouse Genome 430 2.0 Array	1455542_PM_at	-	-
Mouse Genome 430 2.0 Array	1433762_at	-	-
Mouse Genome 430 2.0 Array	1433762_PM_at	-	-
Affymetrix Mouse Clariom S Array	PSR0400005367.mm.1	TC0400000764.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400005367.mm.1	NR_027923.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400005367.mm.1	NR_027923.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400005364.mm.1	TC0400000764.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400005364.mm.1	NR_027923.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400005364.mm.1	NR_027923.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400005366.mm.1	TC0400000764.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400005366.mm.1	NR_027923.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400005366.mm.1	NR_027923.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400005369.mm.1	TC0400000764.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400005369.mm.1	NR_027923.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400005369.mm.1	NR_027923.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400005368.mm.1	TC0400000764.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400005368.mm.1	NR_027923.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400005368.mm.1	NR_027923.1	Refseq
Mouse Expression Set 430	1433762_PM_at	-	-
Mouse Expression Set 430	1455542_PM_at	-	-
Mouse Expression Set 430	1433762_at	-	-
Mouse Expression Set 430	1455542_at	-	-
Affymetrix HT Mouse Genome 430B Array	1455542_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1433762_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1433762_at	-	-
Affymetrix HT Mouse Genome 430B Array	1455542_at	-	-

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