Name: [Mm03972805_s1] [5830416I19Rik]
Creator: Thermo Fisher Scientific
Keywords: [5830416I19Rik] Assay, [RIKEN cDNA 5830416I19 gene] Assay

Assay Details

Gene Symbol: 5830416I19Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045384.1		3	2353		86
GenBank mRNA	AK080054.1	-	1	744		86

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BB219247.2	-	1	359		Chr. 5 - 64049590 - 64050228 [+] on Build GRCm38	86

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RELT-like 1	Rell1	AA536743	-80.3kb	Anti-sense	Chr. 5 - 63888667 - 63968900 on NCBI Build GRCm38
Downstream	phosphoglucomutase 1	Pgm1	3230402E02Rik, Pgm-1, Pgm2	42.6kb	Sense	Chr. 5 - 64092831 - 64128355 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500000588.mm.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Detect Genomic DNA

Mus musculus

1700

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1431286_PM_at	-	-
Mouse Genome 430 2.0 Array	1431286_at	-	-
Mouse Genome 430 2.0 Array	1431286_PM_at	-	-
Affymetrix Mouse Clariom S Array	PSR0500005196.mm.1	TC0500000588.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500005196.mm.1	NR_045384.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500005196.mm.1	NR_045384.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500005197.mm.1	TC0500000588.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500005197.mm.1	NR_045384.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500005197.mm.1	NR_045384.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500005199.mm.1	TC0500000588.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500005199.mm.1	NR_045384.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500005199.mm.1	NR_045384.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500005198.mm.1	TC0500000588.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500005198.mm.1	NR_045384.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500005198.mm.1	NR_045384.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500005195.mm.1	TC0500000588.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500005195.mm.1	NR_045384.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500005195.mm.1	NR_045384.1	Refseq
Mouse Expression Set 430	1431286_PM_at	-	-
Mouse Expression Set 430	1431286_at	-	-
Affymetrix HT Mouse Genome 430B Array	1431286_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1431286_at	-	-

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Catalog #	4426961
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Array Name	Probe IDs	Targets	Target Type
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P126687	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2008434	AK017934.1	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_53_P126687	-	-
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P107442	-	-
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_53_P126687	-	-

System Message

Genomic Map