Name: [Mm04235499_m1] [1500004A13Rik]
Creator: Thermo Fisher Scientific
Keywords: [1500004A13Rik] Assay, [RIKEN cDNA 1500004A13 gene] Assay

Assay Details

Gene Symbol: 1500004A13Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_015498.2		1 - 2	222		100
GenBank mRNA	AK033977.1	-	1 - 2	284		100
	AK036207.1	-	1 - 2	223		100
	AK038592.1	-	1 - 2	223		100
	AK040690.1	-	1 - 2	223		100
	AK078122.1	-		283		100
	AK084105.1	-	1 - 2	223		100
	AK141588.1	-	1 - 2	234		100

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BU703566.1	-	1 - 2	206	Chr. 3 - 88824969 - 88832452 [-] on Build GRCm38	100
GenBankmRNA	BB622183.1	-	1 - 2	283	Chr. 3 - 88784424 - 88832547 [-] on Build GRCm38	100
GenBankmRNA	BB652923.1	-	1 - 2	234	Chr. 3 - 88825006 - 88832498 [-] on Build GRCm38	100
GenBankmRNA	BF471983.1	-	1 - 2	112	Chr. 3 - 88821475 - 88832377 [-] on Build GRCm38	100
GenBankmRNA	BB632433.1	-	1 - 2	223	Chr. 3 - 88825024 - 88832487 [-] on Build GRCm38	100
GenBankmRNA	BB636604.1	-	1 - 2	223	Chr. 3 - 88825129 - 88832487 [-] on Build GRCm38	100
GenBankmRNA	BB628999.1	-	1 - 2	223	Chr. 3 - 88825003 - 88832487 [-] on Build GRCm38	100
GenBankmRNA	BB657396.1	-	1 - 2	223	Chr. 3 - 88824991 - 88832487 [-] on Build GRCm38	100
GenBankmRNA	CX240898.1	-	1 - 2	264	Chr. 3 - 88824914 - 88832529 [-] on Build GRCm38	100
GenBankmRNA	W08215.1	-	1 - 2	196	Chr. 3 - 88825244 - 88832452 [-] on Build GRCm38	100
GenBankmRNA	BY726972.1	-	1 - 2	283	Chr. 3 - 88825084 - 88832547 [-] on Build GRCm38	100
GenBankmRNA	CA321648.1	-	1 - 2	195	Chr. 3 - 88824482 - 88832458 [-] on Build GRCm38	100
GenBankmRNA	BY065836.1	-	1 - 2	223	Chr. 3 - 88825272 - 88832487 [-] on Build GRCm38	100
GenBankmRNA	CF724755.1	-	1 - 2	198	Chr. 3 - 88824886 - 88832463 [-] on Build GRCm38	100
GenBankmRNA	BB625839.1	-	1 - 2	283	Chr. 3 - 88825045 - 88832547 [-] on Build GRCm38	100

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	gon-4-like pseudogene	5830417I10Rik	3632445O20Rik, AA387005		Anti-sense	Chr. 3 - 88777057 - 88829371 on NCBI Build GRCm38
Downstream	misato homolog 1 (Drosophila)	Msto1	BC008103, mst	77.1kb	Sense	Chr. 3 - 88909616 - 88913950 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300002325.mm.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Mus musculus

1700

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2426564	AK075724.1	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P170537	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P167458	-	-
Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) "	A_51_P374026	AK075724.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P374026	AK075724.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P354974	AK083200.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P183822	AK014401.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P654720	AK149017.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P654720	AK017268.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P654720	AK032230.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P654720	AK157887.1	mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P127626	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P22315857	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1429729_PM_at	-	-
Affymetrix HT MG-430 PM Array Plate	1436176_PM_at	-	-
Affymetrix HT MG-430 PM Array Plate	1430660_PM_at	-	-
Mouse Genome 430 2.0 Array	1429729_at	-	-
Mouse Genome 430 2.0 Array	1429729_PM_at	-	-
Mouse Genome 430 2.0 Array	1430660_at	-	-
Mouse Genome 430 2.0 Array	1436176_at	-	-
Mouse Genome 430 2.0 Array	1436176_PM_at	-	-
Mouse Genome 430 2.0 Array	1430660_PM_at	-	-
Affymetrix Mouse Clariom S Array	PSR0300017707.mm.1	NR_015498.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300017707.mm.1	TC0300002325.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300017715.mm.1	NR_015498.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300017715.mm.1	TC0300002325.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300017708.mm.1	NR_015498.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300017708.mm.1	TC0300002325.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300017713.mm.1	NR_015498.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300017713.mm.1	TC0300002325.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300017705.mm.1	NR_015498.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300017705.mm.1	TC0300002325.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300017706.mm.1	NR_015498.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300017706.mm.1	TC0300002325.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300017716.mm.1	NR_015498.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300017716.mm.1	TC0300002325.mm.1	MTA TC
Mouse Expression Set 430	1436176_at	-	-
Mouse Expression Set 430	1436176_PM_at	-	-
Mouse Expression Set 430	1430660_PM_at	-	-
Mouse Expression Set 430	1430660_at	-	-
Mouse Expression Set 430	1429729_PM_at	-	-
Mouse Expression Set 430	1429729_at	-	-
Mouse Genome 430A 2.0 Array	1436176_at	-	-
Mouse Genome 430A 2.0 Array	1436176_PM_at	-	-
Affymetrix HT Mouse Genome 430A Array	1436176_PM_at	-	-
Affymetrix HT Mouse Genome 430A Array	1436176_at	-	-
Affymetrix HT Mouse Genome 430B Array	1429729_at	-	-
Affymetrix HT Mouse Genome 430B Array	1429729_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1430660_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1430660_at	-	-

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System Message

Genomic Map